PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY63541.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bHLH | ||||||||
Protein Properties | Length: 234aa MW: 26628.1 Da PI: 7.1989 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 21.5 | 4.3e-07 | 84 | 129 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h ++Er RR+r ++ + L ++lP+ +K++K +i++ A + I++L GAY63541.1 84 RHVINERMRRERERQNYLALHSILPPG-----TKNDKNSIVKTAANMIHEL 129 5899*********************97.....8***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MDEFLGDQFH GEGDIFFWLD NEALPVNQSA FVAYANRPRT EFVSQNAGNG SNSLSANKRM 60 IQFLRKIQPA KMEHPELDSE RGHRHVINER MRRERERQNY LALHSILPPG TKNDKNSIVK 120 TAANMIHELR CCKQELERKN YELESNLGLK NGGTKIRVNV DNPTSGVDSM LEVLKCLKDL 180 GSSTRSIQAE FSDQKLTAVL DIETQMGAGA VEKDVQRALQ KVEDKLLFRH YQEG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 90 | 95 | RMRRER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43650.1 | 1e-39 | bHLH family protein |