PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY62766.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 780aa MW: 89075.9 Da PI: 6.2574

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY62766.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.8	6.4e-22	146	229	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YAke+GF +r+++s ++++++e + ++C++eg+++ ++ + ++r+etrtgC a++++++ ++++w+v++++l+HnH + GAY62766.1 146 NYYNCYAKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTIKEAN-----SRRKETRTGCLAMIRLRLVESNRWRVDEVKLDHNHLF 229 69**************************************99888.....8999*****************************77 PP
2	FAR1	70.3	4.5e-22	504	587	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YAkevGF+vr+++s +++++e + + ++Cs +g+++ ++ + r r+etrtgC a++++++ ++++w+v ++ leHnH+l GAY62766.1 504 NYYNCYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVN-----RLRKETRTGCPAMIRMRLVDSKRWRVLEVTLEHNHTL 587 69***************************************9988.....99*******************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 780 aa Download sequence
LGQTDRKRGM NGDNAFSPGA GSLSPNPNLH ITIEEGSQNS GQLFEDECND LDIEGSDLGI 60 DSNDLDLEGN DLGIEGNELE IESDGLEIEG NDYDSDSKQI LDNKSNDYGN DRDDRTPVDA 120 QHTSAGNGYS PPVVGMEFES YDDAYNYYNC YAKELGFAIR VKSSWTKRNS KEKRGAVLCC 180 NCEGFKTIKE ANSRRKETRT GCLAMIRLRL VESNRWRVDE VKLDHNHLFD PERAQNSKSH 240 KKMEAGSKRK VEPAVDVEVR TIKLYRTPVV DSVGYGSSYS NEGEITNHVD RKFQHEVVMM 300 SSCFNITQVH ANGPLVTYII KERLDEGNLT NVRNIEVMYD KQGAEVRCIC SCFNFSGFLC 360 RHALCILNYN GVEEIPFQYI LPRWRKDFKR LYVPDLGSNN IDTSNPVQWF DHLYKRAMQV 420 VEEGMISPDH HMVAWQAFKE SLNKMEEAPL SSEQVPDGEC SESQKEGEGE TVVFDGQNGV 480 IEGKKEFVAP AVGMEFESYD DAYNYYNCYA KEVGFRVRVK NSWFKRNSRE KYGAVLCCSS 540 QGFKRIKDVN RLRKETRTGC PAMIRMRLVD SKRWRVLEVT LEHNHTLGAK VYRSIKKMGT 600 GTKKKSLSSS DAEGRTIKLY RALVIDAGGN GNLNAIEREV RNSNCPNQLN LKKGNRREIR 660 DFEVLYNRTA GEVRCICSCF NFYGYLCRHA LCVLNFNGVE EIPSKYILSR WKKDYKRLYI 720 PDHVCNNVDA TDRVQWFNQL YRSALQVVEE GVISLDHYKA ALQTFEESLN RVHDVEEKQE

Sequence ? help Back to Top

Protein Sequence Length: 780 aa Download sequence

LGQTDRKRGM NGDNAFSPGA GSLSPNPNLH ITIEEGSQNS GQLFEDECND LDIEGSDLGI  60
DSNDLDLEGN DLGIEGNELE IESDGLEIEG NDYDSDSKQI LDNKSNDYGN DRDDRTPVDA  120
QHTSAGNGYS PPVVGMEFES YDDAYNYYNC YAKELGFAIR VKSSWTKRNS KEKRGAVLCC  180
NCEGFKTIKE ANSRRKETRT GCLAMIRLRL VESNRWRVDE VKLDHNHLFD PERAQNSKSH  240
KKMEAGSKRK VEPAVDVEVR TIKLYRTPVV DSVGYGSSYS NEGEITNHVD RKFQHEVVMM  300
SSCFNITQVH ANGPLVTYII KERLDEGNLT NVRNIEVMYD KQGAEVRCIC SCFNFSGFLC  360
RHALCILNYN GVEEIPFQYI LPRWRKDFKR LYVPDLGSNN IDTSNPVQWF DHLYKRAMQV  420
VEEGMISPDH HMVAWQAFKE SLNKMEEAPL SSEQVPDGEC SESQKEGEGE TVVFDGQNGV  480
IEGKKEFVAP AVGMEFESYD DAYNYYNCYA KEVGFRVRVK NSWFKRNSRE KYGAVLCCSS  540
QGFKRIKDVN RLRKETRTGC PAMIRMRLVD SKRWRVLEVT LEHNHTLGAK VYRSIKKMGT  600
GTKKKSLSSS DAEGRTIKLY RALVIDAGGN GNLNAIEREV RNSNCPNQLN LKKGNRREIR  660
DFEVLYNRTA GEVRCICSCF NFYGYLCRHA LCVLNFNGVE EIPSKYILSR WKKDYKRLYI  720
PDHVCNNVDA TDRVQWFNQL YRSALQVVEE GVISLDHYKA ALQTFEESLN RVHDVEEKQE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	651	657	LKKGNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	2e-60	FAR1 family protein