PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY62184.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB

Protein Properties

Length: 362aa MW: 40346 Da PI: 6.238

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY62184.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.8	1.4e-19	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++++G g+W++ ++ g++R++k+c++rw +yl GAY62184.1 15 KGPWTPEEDQKLIDYIRKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 62 79********************************************97 PP
2	Myb_DNA-binding	56.7	5.5e-18	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++l+v++++ lG++ W++Ia +++ gRt++++k++w+++l GAY62184.1 68 RGKFSEEEEQLIVNLHAVLGNK-WSAIATRLP-GRTDNEIKNFWNTHL 113 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MESLQISDEI NNIKKGPWTP EEDQKLIDYI RKHGHGSWRA LPKLAGLNRC GKSCRLRWTN 60 YLRPDIKRGK FSEEEEQLIV NLHAVLGNKW SAIATRLPGR TDNEIKNFWN THLKKKLLQM 120 GIDPVTHRPR TDLNNVLANL PQLLAAANFA VGNLMNVPNS WDINALKLQS DATQLAKIQL 180 LHNIIQILST SPPPNIEASS LLGSSLGDNY NQLFEFLRMN SHQFHGNNGN GNGNVPFGFT 240 PQEPNQILSN LLNFDSASQL PHLGDYTNTS TSNTSQLGSS SYANNIPTSN QLPALVSVSS 300 ADCSALNQQI ETKINPNDIS NPSSTLTTFE ANWGDFMDDE ASQSYWRDFI DQASSQPWPI 360 SE

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MESLQISDEI NNIKKGPWTP EEDQKLIDYI RKHGHGSWRA LPKLAGLNRC GKSCRLRWTN  60
YLRPDIKRGK FSEEEEQLIV NLHAVLGNKW SAIATRLPGR TDNEIKNFWN THLKKKLLQM  120
GIDPVTHRPR TDLNNVLANL PQLLAAANFA VGNLMNVPNS WDINALKLQS DATQLAKIQL  180
LHNIIQILST SPPPNIEASS LLGSSLGDNY NQLFEFLRMN SHQFHGNNGN GNGNVPFGFT  240
PQEPNQILSN LLNFDSASQL PHLGDYTNTS TSNTSQLGSS SYANNIPTSN QLPALVSVSS  300
ADCSALNQQI ETKINPNDIS NPSSTLTTFE ANWGDFMDDE ASQSYWRDFI DQASSQPWPI  360
SE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	2e-93	MYB family protein