PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY62164.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | GATA | ||||||||
Protein Properties | Length: 542aa MW: 60261.9 Da PI: 6.3514 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 49.9 | 4.3e-16 | 7 | 41 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+ GAY62164.1 7 CYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGT 41 ****************88888***********997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 542 aa Download sequence |
MGKQGPCYHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAEPDDYEDH 60 RVSKVKSISI NKNKDVKVLK RKSNYDNVVV GGFAPDYNHG YRKVVDEDTS NRSSSGSAIS 120 NSESCVQFGS ADASDLTGPA QSNVWDSVVP SKKRTCVNRP KQSPVEKLTK DLYTILHEQQ 180 SSYFSGSSEE DLLFESETPM VSVEIGHGSV LIRHPSSIAR EEESEASSLS VENKQYLVNE 240 SYSRSATLHV YNDYQGVNFS SRNMDKAKNF IEQGMQQDQL KRDKSQQEKL QILGSHTSPL 300 CEIDLNDILN FNEFVGHLTH EEQQQLLKYL PLNDTTVFPD SLNSMFDSLQ FKENISSFQQ 360 LLAEGVFDLS FLGVATEDCR TLKRLALSNL TTSNWVEHYQ SLKKCKSGTG GSYVSRGPDA 420 AASNNIINAK RLRDGQNQKF PEAKNIMKSP KRVTVKATYE NKEFMENDGS CFSPRSLFAL 480 PSDGSSLMLE SLHFVDESSD QDLLLDVPSN GSFPQAELLH PSLSFGQQAS SSSSAYPNHA 540 RP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17570.3 | 1e-158 | GATA family protein |