PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY61779.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB | ||||||||
Protein Properties | Length: 244aa MW: 28626.7 Da PI: 9.1814 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.6 | 4.4e-16 | 4 | 44 | 6 | 47 |
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + Ede+l ++v+++G+++W++Ia++++ gR++k+c++rw++ GAY61779.1 4 PAEDEKLRELVERYGPHNWNAIAEKLQ-GRSGKSCRLRWFNQ 44 67*************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 55.6 | 1.2e-17 | 51 | 94 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l+ ++ +G++ W+ Iar ++ gRt++ +k++w+ GAY61779.1 51 RSPFTEEEEERLLASHRIHGNR-WAVIARLFP-GRTDNAVKNHWHV 94 789*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MYRPAEDEKL RELVERYGPH NWNAIAEKLQ GRSGKSCRLR WFNQLDPRIN RSPFTEEEEE 60 RLLASHRIHG NRWAVIARLF PGRTDNAVKN HWHVIMARRC RERSRLYAKR AAQTFLNDQK 120 SSSSSRPNHH AQTGCTDLET KNNNLASFVE IFRGRFHYST YPHNQLQFFR ELCDGNTSHL 180 GSKKEDKNQP VEFYDFLQVN TDSTKSEVID TARRDDEEVD QEARVQRNAS SGVQFIDFLS 240 VRNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17950.1 | 3e-85 | MYB family protein |