PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY61144.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 162aa MW: 18787.6 Da PI: 10.6659 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 91.9 | 5.7e-29 | 2 | 56 | 3 | 58 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 +v Y+eC++NhAas+G +a+DGCgEf+++ g++gt++a++CaACgCHR+FHR+e + GAY61144.1 2 AVSYRECRRNHAASIGRYAYDGCGEFLKA-GKDGTKEAFHCAACGCHRSFHRKELS 56 689*************************9.999********************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence |
MAVSYRECRR NHAASIGRYA YDGCGEFLKA GKDGTKEAFH CAACGCHRSF HRKELSLSVA 60 SIHRRRRHHD HEHKNYKAKT KRTKITEEQK SKMRRFADKL GWKPQRHDEE EVGKFCGEVG 120 ITRKMFKVWL NNNRRRPVPV RVPEKCRAAS VVGVKNLLAA EE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 64 | 92 | RRRRHHDHEHKNYKAKTKRTKITEEQKSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 2e-33 | ZF-HD family protein |