PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY61057.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GRAS
Protein Properties Length: 667aa    MW: 74046.4 Da    PI: 6.3012
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY61057.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS417.71e-1272856511373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 lv+lL++c+ea+ s++  ++++++a+l + asp+g+p+ Rl+ay+teALa r++r +++++++ pp++ + +  +++ aal+l+++++Pi+kf h+taN
  GAY61057.1 285 LVRLLTDCVEAIGSRNIPAVNHFIAKLGDVASPRGSPISRLTAYYTEALALRVSRLWPHTFHITPPRDFD-RVDDDSGAALRLLNQATPIPKFIHFTAN 382
                 6899*****************************************************************8.5678888999****************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 +++l+a++g++rvHiiDfdi+qGlQWp+++q+LasRp++p ++RiTg+g+    sk+el+etg+rL+ fAe+l++pfef++ v++rled++l++L+vk+
  GAY61057.1 383 EMLLRAFDGKDRVHIIDFDIKQGLQWPSFFQSLASRPNPPSHVRITGIGE----SKQELNETGDRLSGFAEALNLPFEFHP-VVDRLEDVRLWMLHVKE 476
                 **************************************************....***************************.7**************** PP

        GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnv 297
                 +E++aVn+++qlh++l +        +++L l++s++P++v ++eqea+hns+ + +r++++l+yysalfd ++ +lp +s  rik+E++ ++re++++
  GAY61057.1 477 KESVAVNCIFQLHKTLYSGNGG--VLRDFLGLIRSTNPTIVLMAEQEAEHNSPFLETRVSNSLRYYSALFDLIDYSLPLDSPVRIKIEEM-FAREVRSI 572
                 ****************544433..3589**************************************************************.******** PP

        GRAS 298 vacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee...sgslvlgWkdrpLvsvSaW 373
                 vaceg++r erhe++e+Wr+++e+ GF+ + +se+++ q ++ll++++   y v+++    ++l+l W d+pL++vSaW
  GAY61057.1 573 VACEGSDRLERHESFENWRRMMEQGGFRCMGISEREMLQSQMLLKMYSCGNYGVKKQgqdGAALTLSWIDQPLYTVSAW 651
                 ************************************************55588885444266677************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 667 aa     Download sequence    
MLAGCSSSTL LSPRHRLRSE ASAQFPACHF QLPSMSTQRL DLPCSFSRKD SSRSQPIRPV  60
GLSVEKPIEP KTSACSLKQN VRLPPLATST QREIKDEFWE KGKSLKRFAE GGLVDESCIN  120
RAKRKKGSSG DNDGKNDDIH EGGGHSLSLG QLGTGNFWFQ PSFTGQNVPQ VPFTLTCSGE  180
KDRVCYVPGE FISPPLPLSN NPWVESVITE ITDLGEKDGD ETSHRLAKEV SASSTSSESG  240
SLALRLHENP VEHDVGNGSR NPYPHQGGVE ASEEGTNQGE NGFELVRLLT DCVEAIGSRN  300
IPAVNHFIAK LGDVASPRGS PISRLTAYYT EALALRVSRL WPHTFHITPP RDFDRVDDDS  360
GAALRLLNQA TPIPKFIHFT ANEMLLRAFD GKDRVHIIDF DIKQGLQWPS FFQSLASRPN  420
PPSHVRITGI GESKQELNET GDRLSGFAEA LNLPFEFHPV VDRLEDVRLW MLHVKEKESV  480
AVNCIFQLHK TLYSGNGGVL RDFLGLIRST NPTIVLMAEQ EAEHNSPFLE TRVSNSLRYY  540
SALFDLIDYS LPLDSPVRIK IEEMFAREVR SIVACEGSDR LERHESFENW RRMMEQGGFR  600
CMGISEREML QSQMLLKMYS CGNYGVKKQG QDGAALTLSW IDQPLYTVSA WAPVDVAGGS  660
SSFSQPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.10.0GRAS family protein