PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY60578.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB | ||||||||
Protein Properties | Length: 325aa MW: 35641.5 Da PI: 7.0564 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.6 | 2.1e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+++v+ +G+g +W + +++ g++R++k+c++rw++yl GAY60578.1 14 RGPWSPEEDATLKRYVETHGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 41.3 | 3.5e-13 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g++T++Ed + + q G++ W+ Ia++++ gRt++++k++w++ GAY60578.1 69 GNFTEDEDHVICTLYSQIGSR-WSIIASRLP-GRTDNDVKNYWNT 111 89*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence |
MGRAPCCDKA NVKRGPWSPE EDATLKRYVE THGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPDIKHGN FTEDEDHVIC TLYSQIGSRW SIIASRLPGR TDNDVKNYWN TKLKKKLLAG 120 KVSLLTSNNA NNSPIISGSN PTDTNHLHDS NPSISLPKSE ACDPQYPASP TQLSSSPSMP 180 LLTDHHDHIA YGLSTVNNHH FIPPHSAGMS FTSSTVSHQL GTSLKNSPVL TSSQEGSSVT 240 LPAGNNVNGG VEDADQILMD FGFGIGDPCD QYYVNNNGTL WYNHQEKATS HHDDLSNWYP 300 SLLAADSSYA DIKPQGLNQS VINQY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49690.1 | 4e-73 | MYB family protein |