PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY59748.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB_related

Protein Properties

Length: 583aa MW: 67188.1 Da PI: 6.6684

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY59748.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25	4.3e-08	377	417	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT+eE el + ++++G++ Wk a +g + + ++k+ w+ GAY59748.1 377 KWTPEELELVRKFHEKHGSN-WKMLADALG--KHRFHVKDAWRR 417 8***************99.******9..667778887776 PP

Sequence ? help Back to Top
Protein Sequence Length: 583 aa Download sequence
MGKKTLGKKG HERENGIVTE GEVDFKEKEK KRDVDLRASE NEVEMKDDVD ENEKKINEVG 60 GNDFEFGDSR NGVIVEGHVD TNNTGSEKER QKKKKKKKKR KLEISEDENE IPKDMRINND 120 EEVNEINEDS KQKQLAMDEN ASLQKNDQED SGNNSELKVR KKRKKLLKEG MNNDGIGSSL 180 SDNAEGNNKE TREAIREREQ LDGNMMEKAE KLCNANSRVE EIEGHAVLEE DGIKEKKKAT 240 SVKKHSGGDK KASQTKKGVE TNDLSEGSAQ KERSKKVSFS NDVQVFPSSD VKNGKDDGFV 300 RGKRFSKEED EMIKRAVMNY IETHGLGEEG LNMVLHCRSH PEVKHCWKEI GSALPWRPYD 360 SIYYRAHIIF QRDENRKWTP EELELVRKFH EKHGSNWKML ADALGKHRFH VKDAWRRVRL 420 PNQKKGQWSQ EEYQKLFDLV NMDLRMRALE EKKTKHGMLR DNISWEAISD KLATRSNAIC 480 CMKWYDQLTS PMVAEGKWAD TDDFHLVNAL SSLDACCMDD VDWDNLLEHR SGTLCQKRWN 540 QMVKHLGTDG NKSFPEQVEI LSTRYSPDVL EAREAYNSKP AVD

Sequence ? help Back to Top

Protein Sequence Length: 583 aa Download sequence

MGKKTLGKKG HERENGIVTE GEVDFKEKEK KRDVDLRASE NEVEMKDDVD ENEKKINEVG  60
GNDFEFGDSR NGVIVEGHVD TNNTGSEKER QKKKKKKKKR KLEISEDENE IPKDMRINND  120
EEVNEINEDS KQKQLAMDEN ASLQKNDQED SGNNSELKVR KKRKKLLKEG MNNDGIGSSL  180
SDNAEGNNKE TREAIREREQ LDGNMMEKAE KLCNANSRVE EIEGHAVLEE DGIKEKKKAT  240
SVKKHSGGDK KASQTKKGVE TNDLSEGSAQ KERSKKVSFS NDVQVFPSSD VKNGKDDGFV  300
RGKRFSKEED EMIKRAVMNY IETHGLGEEG LNMVLHCRSH PEVKHCWKEI GSALPWRPYD  360
SIYYRAHIIF QRDENRKWTP EELELVRKFH EKHGSNWKML ADALGKHRFH VKDAWRRVRL  420
PNQKKGQWSQ EEYQKLFDLV NMDLRMRALE EKKTKHGMLR DNISWEAISD KLATRSNAIC  480
CMKWYDQLTS PMVAEGKWAD TDDFHLVNAL SSLDACCMDD VDWDNLLEHR SGTLCQKRWN  540
QMVKHLGTDG NKSFPEQVEI LSTRYSPDVL EAREAYNSKP AVD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	89	95	ERQKKKK
2	92	98	KKKKKKK
3	92	100	KKKKKKKKR
4	93	99	KKKKKKK
5	93	101	KKKKKKKKR
6	94	100	KKKKKKK
7	94	102	KKKKKKRKL
8	95	101	KKKKKKK
9	95	103	KKKKKKRKL
10	96	101	KKKKRK
11	97	102	KKKRKL
12	161	165	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41020.1	1e-137	MYB_related family protein