PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY59613.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Dof

Protein Properties

Length: 330aa MW: 36084 Da PI: 6.8271

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY59613.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.8	5.7e-39	29	89	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++alkcprCds ntkfCyynny+lsqPr+fCk+CrryWtkGG lrnvPvGgg+rk k+ss GAY59613.1 29 NHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSS 89 57899****************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MQDIHSIGGG RLFGGGGGDR RLRPHPHQNH QALKCPRCDS LNTKFCYYNN YNLSQPRHFC 60 KNCRRYWTKG GVLRNVPVGG GCRKTKRSSK PKPNSESSAQ TQTQTQTEAP AAGERDRKAN 120 SHSSSESSST LTVTNNNNNN NNTSVETVSV HSSSSVSNVL SAMNNNNNNN NNDPGFETAP 180 TTALLDQASS DCGIFSEIGS FTSLITSSNE ALPFGFSNLL NNAQQNLEHV QNEQQWQQEQ 240 QKLASASSMG GHHELKLHEM ASGLLDQTVH DELSALQDRS GNTGGFGSLD WHGSADHQGL 300 FDLPNAVDHA SYWSQSTQWT DQDHPSLYLP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	8	17	GGGRLFGGGG
2	9	18	GGGRLFGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60850.1	4e-39	Dof family protein