PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY59167.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 316aa    MW: 36885.3 Da    PI: 9.1344
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY59167.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.67e-16441171796
                 E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 ++p++ ++++g++   s   t++ ++gr+W+vkl   k+++r+ +++GW++Fv +n + +g f+vF+++++s+f   v +
  GAY59167.1  44 RIPRTLVRNFGHE--LSDVATIKVPNGRVWRVKL--MKNGRRFSFGDGWQDFVASNSISVGYFLVFRYEKNSTF--QVLI 117
                 5999999888755..78899999***********..********************************999999..5555 PP
2B343.74.9e-142303151698
                 EE--HHH.HTT---..--SEEEEEETTS.....-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  16 lvlpkkfaeehggkkeesktltledesg.....rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 +++p +fa ++ +++ +s  ++l+ ++      rs +   i+++  g+++lt+GW +F   ++Lk+gD+++Fkl++r++  l ++vfr
  GAY59167.1 230 VYVPASFAYRFVNQNVKS--IKLRGSNAelnlpRSDKSVRIWWRDNGGFYLTRGWMKFSTHKNLKDGDICIFKLIDRKDVLLELSVFR 315
                 678899987775554454..7777766677888666666679*********************************9988888888887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MLPSSSSSLP ETPQSFLKVV LPSTLRDKEI DPLVLSFDPF GFERIPRTLV RNFGHELSDV  60
ATIKVPNGRV WRVKLMKNGR RFSFGDGWQD FVASNSISVG YFLVFRYEKN STFQVLIHDM  120
TACEIDYPYS DEESDEWSSE FEDDMESEEC VEISKELFSS KCRCQRQKKS KVKGLFRNLL  180
ENMGMYISEK SEDFTVKESE RAIKIVRSLK LKDPSFMVIF RKREKPCREV YVPASFAYRF  240
VNQNVKSIKL RGSNAELNLP RSDKSVRIWW RDNGGFYLTR GWMKFSTHKN LKDGDICIFK  300
LIDRKDVLLE LSVFRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01580.11e-22B3 family protein