PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY59153.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | YABBY | ||||||||
Protein Properties | Length: 186aa MW: 20790.7 Da PI: 8.5774 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 233.4 | 5.5e-72 | 2 | 159 | 2 | 170 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssek 100 +++ +se+vCyv+Cn+CntilavsvP +slf++vtvrCGhC++ll vn+ a q+++ ++ +l++++ + e+++++ + ++s+ ++ ss GAY59153.1 2 SLDLASERVCYVHCNYCNTILAVSVPCSSLFNIVTVRCGHCANLLNVNMVSALQAVPLQDP-------QLQKQHINLEDSITK-DCGSSSKCNKFSSA- 91 567799*******************************************999999999985.......332222222222222.22233333333332. PP YABBY 101 lsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 e ++e+pr+pp irPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl GAY59153.1 92 -FETAEHETPRMPP-IRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 159 .35678999**999.9****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MSLDLASERV CYVHCNYCNT ILAVSVPCSS LFNIVTVRCG HCANLLNVNM VSALQAVPLQ 60 DPQLQKQHIN LEDSITKDCG SSSKCNKFSS AFETAEHETP RMPPIRPPEK RQRVPSAYNR 120 FIKEEIQRIK ASNPDISHRE AFSTAAKNWA HFPHIHFGLK LDGNKQAKLD KAAAYAEGTQ 180 KSNGFY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 5e-84 | YABBY family protein |