PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY58727.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 324aa    MW: 35969.9 Da    PI: 4.6324
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY58727.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH331.1e-10138181755
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + E++RR ++++++ +Lr l+P+      +K++Ka+i+  Av Y+++Lq
  GAY58727.1 138 ISEQKRRGKMKEKLYQLRALVPNI-----TKMDKASIVGDAVSYVQELQ 181
                 67*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MDAFGNPPKQ SNDFELHDFI DDQNFNQFID LIRGENEDPF ATFDCRVISG CCDDSSTTPD  60
SHLFDLSAAE STEVTDHNNF VLNSSTLSSL KIGGDVKEGD HYDEDNDGND ASGATRTTTI  120
IDASSKKPKG DHRSRTLISE QKRRGKMKEK LYQLRALVPN ITKMDKASIV GDAVSYVQEL  180
QTTAKNLKAE IADLEASSAS SENWKESIEN TKNTQIQSNS TNSRKKIIMQ MDVFQVEERG  240
FYLKLVSNKG EGVATSLYKA LESLTSFNVQ NSNLVAESER FVLTFTLNAK DNDQISMQLP  300
NLKLWVANAL LNQGFQVLIT PLSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.15e-89bHLH family protein