PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY58579.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 399aa    MW: 44041.2 Da    PI: 4.5956
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY58579.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.50.000553513901054
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 + R d+i +a+  L+ ++P a    ++K    + L +A++Y++sL
  GAY58579.1 351 QSRKDKIHTALRILQGIIPGA----NGKDP-LSLLDEAIDYLQSL 390
                 56899***************8....55554.66**********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    
MVCQAASQTR FRALKYENGS AGKPTIIVRV IACFKPMEDC QAHESWIYRQ HSAWQLPDLN  60
CMRTSLDPRQ PECLPSLIAP ENYMFSANAA LPGYVSPGFA NLKTEQINGA HKALQILPPR  120
FQNLVPSPYP YLNEIQPAFP CGFSEQAAPN EKLGSLQKGL LVFDQSGNQT QLVYSSVCPS  180
VLNTPATLKK EVSVNGFLQD KAIKRDQFTS VKPLLHEEFD ENHISGKECE MHEDTEEINA  240
LLYSDGDDDY SNGDDSEDDE VKSTDHSPVA IEGKYEKHDL TLEISEEVAS SDGPNKRQKL  300
LNGGYNKSSQ TDTACSVQLE GSHECDNDAE SGYANGQTQK EEIDFILGNM QSRKDKIHTA  360
LRILQGIIPG ANGKDPLSLL DEAIDYLQSL KLKAVALGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67110.13e-08bHLH family protein