PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY58483.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 798aa MW: 91606.6 Da PI: 8.3313

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY58483.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.5	1.4e-20	181	274	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+e+Ak++GFs+r+++++ + + t+r fvC + g++ ++++++k +r+r+++r+gC+a ++++k + +w+vt + ++HnHel GAY58483.1 181 EYYSEFAKSCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPIKTSNENKPQRNRKSSRCGCQAYMRISKVTelgAPEWRVTGFANNHNHELL 274 69***********9998877356667999************99*****************998887889***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 798 aa Download sequence
MGGEWMFLHK YIDNQVNLDN ERGRENKEAV PGKINSSDCA FIPHGQRTIG NVRRIHKRVL 60 VTSLRKLGLL LQQYLSFNQM RHHWLNAISI GGFEVEQEQP VISAKGSKVY LKGVNERNMM 120 SDDAGQMLMV YDDPSDQRSL SLDDTSSTEE SPDETRLSLE STNDVVPYIG QRFPTHDAAY 180 EYYSEFAKSC GFSIRRHRTE GKDGVGKGLT RRYFVCHRAG NTPIKTSNEN KPQRNRKSSR 240 CGCQAYMRIS KVTELGAPEW RVTGFANNHN HELLEPNQVR FLPAYRTISE TDKSRILMFA 300 KTGISVQQMM RLMELEKCVE PGYLPFTEKD VRNLLQSIRK LDPEDESVDL LRMCRNIKEK 360 DPNFRYEYTL DSNNRLENIA WSYASSIQAY EIFGDAVVFD TTHRLTALDM PLGIWVGVNN 420 YGVPCFFGCT LLREENLRSF SWALKAFLAF MDGKAPQTIL TDQNMCLKEA IAMEMPVTKH 480 ALCIWMIVVK FPSWFNAVLG ERYNEWKAEF YRLYNLESIE DFEMGWRDMV NSFGLHTNRH 540 IANLFALRMQ WALPYLRSNF FAGMTTTGHS KAINAFIQRF LGAQTRLAHF VEQVAVAVDF 600 KDQAAEQQTM QQNLQNICLK TGAPMESHAA SVLTPFAFSK LQEQLVLAAH YASFPFEDGF 660 LVRHHTKLEG GRKVYWAPQE GIISCSCHQF EFSGILCRHT LRVLSTGNCF QIPERYLPLR 720 WRKISTHSVK LLQSSPSDHA ERIQFLQSMV SSLIAESVKS KERLDLATEQ VSYLLSRVRQ 780 QPVSTQGLRD ISPLHRNL

Sequence ? help Back to Top

Protein Sequence Length: 798 aa Download sequence

MGGEWMFLHK YIDNQVNLDN ERGRENKEAV PGKINSSDCA FIPHGQRTIG NVRRIHKRVL  60
VTSLRKLGLL LQQYLSFNQM RHHWLNAISI GGFEVEQEQP VISAKGSKVY LKGVNERNMM  120
SDDAGQMLMV YDDPSDQRSL SLDDTSSTEE SPDETRLSLE STNDVVPYIG QRFPTHDAAY  180
EYYSEFAKSC GFSIRRHRTE GKDGVGKGLT RRYFVCHRAG NTPIKTSNEN KPQRNRKSSR  240
CGCQAYMRIS KVTELGAPEW RVTGFANNHN HELLEPNQVR FLPAYRTISE TDKSRILMFA  300
KTGISVQQMM RLMELEKCVE PGYLPFTEKD VRNLLQSIRK LDPEDESVDL LRMCRNIKEK  360
DPNFRYEYTL DSNNRLENIA WSYASSIQAY EIFGDAVVFD TTHRLTALDM PLGIWVGVNN  420
YGVPCFFGCT LLREENLRSF SWALKAFLAF MDGKAPQTIL TDQNMCLKEA IAMEMPVTKH  480
ALCIWMIVVK FPSWFNAVLG ERYNEWKAEF YRLYNLESIE DFEMGWRDMV NSFGLHTNRH  540
IANLFALRMQ WALPYLRSNF FAGMTTTGHS KAINAFIQRF LGAQTRLAHF VEQVAVAVDF  600
KDQAAEQQTM QQNLQNICLK TGAPMESHAA SVLTPFAFSK LQEQLVLAAH YASFPFEDGF  660
LVRHHTKLEG GRKVYWAPQE GIISCSCHQF EFSGILCRHT LRVLSTGNCF QIPERYLPLR  720
WRKISTHSVK LLQSSPSDHA ERIQFLQSMV SSLIAESVKS KERLDLATEQ VSYLLSRVRQ  780
QPVSTQGLRD ISPLHRNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein