PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY58114.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Protein Properties

Length: 949aa MW: 105583 Da PI: 6.9633

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY58114.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	46.3	7.6e-15	342	427	1	83
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFk 83 f+k+l+ sd+++ grlvlpk +ae++ +++ e++ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+ +++ GAY58114.1 342 FEKILSASDAGRIGRLVLPKACAEAYfpHISQSEGVPLRVQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLRAGDTSMIH 427 99************************777778999***********99899999999.**************98877 PP

Sequence ? help Back to Top
Protein Sequence Length: 949 aa Download sequence
MVANSVNLAL IMGPRICMNP KCRTANTHEW KKGWLLRSGV CADLCYDCGS AYENFIFCNT 60 FHLEEPGWRE CNFCSKRLHC GCRASNSFLE LLDYGGVGCR SCAMSPRLHL IQRDEIPNGF 120 GALTKKDSDD TQTPMLENRV VGDGTAEGKL TQLCRIMEAN EPSFLAPFQR GDTIVSLGQE 180 KREELRLPFG EVGTGFSSAT KLSSRSSKFT KPDGSRSMLD VRDMPESLAQ RSSSMSLGVP 240 AGCSNFVPPF SNGAADGREP CKAHPSFQQG QRSRPILPKP SKTGLTISSE TKKSTASQLR 300 IARPPAEGRG KNHLLPRYWP RITDQELQQL SGDLNSTIVP LFEKILSASD AGRIGRLVLP 360 KACAEAYFPH ISQSEGVPLR VQDVKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLRA 420 GDTSMIHSIL TRDDKITFSR IDPGGKLVMG FRKAPIPGDM QDAQTSAITN GCPGESFLSG 480 VTENLPTVSG YSGHFQMLKG SKDPHIDALS EHLSLAEGDN GWHKSENHGQ KTNEDSPQKS 540 LLGMEKKRTR NIGSKSKRLL MHSEEAMELR LTWEEAQDLL RPSPSARPNI VTIEDHEFEE 600 YDEPPVFGKR TVFTARPSGE QEQWAQCDDC SKWRKLPTDA LLPPKWTCSD NVWDSIRCSC 660 SAAEEMIQKD LENLLRVGRE SKKRKIVESQ RRDQQNEPSG LDALATAAVL GDYAGDSGEP 720 SSVGATTTRH PRHRPGCTCI VCIQPPSGKG KHKPTCTCNV CMTVKRRFKT LMLRKKRRQS 780 EREVEVAQKN HSDQMGDSEM NGSVKQESVP TSHTDNEISQ TKSQTEVAES SSAQIGLDLN 840 CYPNREDMQP EESRVSIMTL DRVASVPLED CHPNGLASLS SCMLQQVNNG DHERLLSDES 900 NSSYKQFQDV ERIFFCYSCA FYELFMDDVE GCANGRLHEL ELSVFSQAF

Sequence ? help Back to Top

Protein Sequence Length: 949 aa Download sequence

MVANSVNLAL IMGPRICMNP KCRTANTHEW KKGWLLRSGV CADLCYDCGS AYENFIFCNT  60
FHLEEPGWRE CNFCSKRLHC GCRASNSFLE LLDYGGVGCR SCAMSPRLHL IQRDEIPNGF  120
GALTKKDSDD TQTPMLENRV VGDGTAEGKL TQLCRIMEAN EPSFLAPFQR GDTIVSLGQE  180
KREELRLPFG EVGTGFSSAT KLSSRSSKFT KPDGSRSMLD VRDMPESLAQ RSSSMSLGVP  240
AGCSNFVPPF SNGAADGREP CKAHPSFQQG QRSRPILPKP SKTGLTISSE TKKSTASQLR  300
IARPPAEGRG KNHLLPRYWP RITDQELQQL SGDLNSTIVP LFEKILSASD AGRIGRLVLP  360
KACAEAYFPH ISQSEGVPLR VQDVKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLRA  420
GDTSMIHSIL TRDDKITFSR IDPGGKLVMG FRKAPIPGDM QDAQTSAITN GCPGESFLSG  480
VTENLPTVSG YSGHFQMLKG SKDPHIDALS EHLSLAEGDN GWHKSENHGQ KTNEDSPQKS  540
LLGMEKKRTR NIGSKSKRLL MHSEEAMELR LTWEEAQDLL RPSPSARPNI VTIEDHEFEE  600
YDEPPVFGKR TVFTARPSGE QEQWAQCDDC SKWRKLPTDA LLPPKWTCSD NVWDSIRCSC  660
SAAEEMIQKD LENLLRVGRE SKKRKIVESQ RRDQQNEPSG LDALATAAVL GDYAGDSGEP  720
SSVGATTTRH PRHRPGCTCI VCIQPPSGKG KHKPTCTCNV CMTVKRRFKT LMLRKKRRQS  780
EREVEVAQKN HSDQMGDSEM NGSVKQESVP TSHTDNEISQ TKSQTEVAES SSAQIGLDLN  840
CYPNREDMQP EESRVSIMTL DRVASVPLED CHPNGLASLS SCMLQQVNNG DHERLLSDES  900
NSSYKQFQDV ERIFFCYSCA FYELFMDDVE GCANGRLHEL ELSVFSQAF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	765	776	KRRFKTLMLRKK
2	765	777	KRRFKTLMLRKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein