PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY58113.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Protein Properties

Length: 937aa MW: 104186 Da PI: 6.9425

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY58113.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.1	1.7e-18	342	441	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k+l+ sd+++ grlvlpk +ae++ +++ e++ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+++F++++ +++lv++ GAY58113.1 342 FEKILSASDAGRIGRLVLPKACAEAYfpHISQSEGVPLRVQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLRAGDTITFSRID-PGGKLVMG 438 99************************777778999***********99899999999.*******************887.78878887 PP EE- CS B3 96 vfr 98 +++ GAY58113.1 439 FRK 441 776 PP

Sequence ? help Back to Top
Protein Sequence Length: 937 aa Download sequence
MVANSVNLAL IMGPRICMNP KCRTANTHEW KKGWLLRSGV CADLCYDCGS AYENFIFCNT 60 FHLEEPGWRE CNFCSKRLHC GCRASNSFLE LLDYGGVGCR SCAMSPRLHL IQRDEIPNGF 120 GALTKKDSDD TQTPMLENRV VGDGTAEGKL TQLCRIMEAN EPSFLAPFQR GDTIVSLGQE 180 KREELRLPFG EVGTGFSSAT KLSSRSSKFT KPDGSRSMLD VRDMPESLAQ RSSSMSLGVP 240 AGCSNFVPPF SNGAADGREP CKAHPSFQQG QRSRPILPKP SKTGLTISSE TKKSTASQLR 300 IARPPAEGRG KNHLLPRYWP RITDQELQQL SGDLNSTIVP LFEKILSASD AGRIGRLVLP 360 KACAEAYFPH ISQSEGVPLR VQDVKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLRA 420 GDTITFSRID PGGKLVMGFR KAPIPGDMQD AQTSAITNGC PGESFLSGVT ENLPTVSGYS 480 GHFQMLKGSK DPHIDALSEH LSLAEGDNGW HKSENHGQKT NEDSPQKSLL GMEKKRTRNI 540 GSKSKRLLMH SEEAMELRLT WEEAQDLLRP SPSARPNIVT IEDHEFEEYD EPPVFGKRTV 600 FTARPSGEQE QWAQCDDCSK WRKLPTDALL PPKWTCSDNV WDSIRCSCSA AEEMIQKDLE 660 NLLRVGRESK KRKIVESQRR DQQNEPSGLD ALATAAVLGD YAGDSGEPSS VGATTTRHPR 720 HRPGCTCIVC IQPPSGKGKH KPTCTCNVCM TVKRRFKTLM LRKKRRQSER EVEVAQKNHS 780 DQMGDSEMNG SVKQESVPTS HTDNEISQTK SQTEVAESSS AQIGLDLNCY PNREDMQPEE 840 SRVSIMTLDR VASVPLEDCH PNGLASLSSC MLQQVNNGDH ERLLSDESNS SYKQFQDVER 900 IFFCYSCAFY ELFMDDVEGC ANGRLHELEL SVFSQAF

Sequence ? help Back to Top

Protein Sequence Length: 937 aa Download sequence

MVANSVNLAL IMGPRICMNP KCRTANTHEW KKGWLLRSGV CADLCYDCGS AYENFIFCNT  60
FHLEEPGWRE CNFCSKRLHC GCRASNSFLE LLDYGGVGCR SCAMSPRLHL IQRDEIPNGF  120
GALTKKDSDD TQTPMLENRV VGDGTAEGKL TQLCRIMEAN EPSFLAPFQR GDTIVSLGQE  180
KREELRLPFG EVGTGFSSAT KLSSRSSKFT KPDGSRSMLD VRDMPESLAQ RSSSMSLGVP  240
AGCSNFVPPF SNGAADGREP CKAHPSFQQG QRSRPILPKP SKTGLTISSE TKKSTASQLR  300
IARPPAEGRG KNHLLPRYWP RITDQELQQL SGDLNSTIVP LFEKILSASD AGRIGRLVLP  360
KACAEAYFPH ISQSEGVPLR VQDVKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLRA  420
GDTITFSRID PGGKLVMGFR KAPIPGDMQD AQTSAITNGC PGESFLSGVT ENLPTVSGYS  480
GHFQMLKGSK DPHIDALSEH LSLAEGDNGW HKSENHGQKT NEDSPQKSLL GMEKKRTRNI  540
GSKSKRLLMH SEEAMELRLT WEEAQDLLRP SPSARPNIVT IEDHEFEEYD EPPVFGKRTV  600
FTARPSGEQE QWAQCDDCSK WRKLPTDALL PPKWTCSDNV WDSIRCSCSA AEEMIQKDLE  660
NLLRVGRESK KRKIVESQRR DQQNEPSGLD ALATAAVLGD YAGDSGEPSS VGATTTRHPR  720
HRPGCTCIVC IQPPSGKGKH KPTCTCNVCM TVKRRFKTLM LRKKRRQSER EVEVAQKNHS  780
DQMGDSEMNG SVKQESVPTS HTDNEISQTK SQTEVAESSS AQIGLDLNCY PNREDMQPEE  840
SRVSIMTLDR VASVPLEDCH PNGLASLSSC MLQQVNNGDH ERLLSDESNS SYKQFQDVER  900
IFFCYSCAFY ELFMDDVEGC ANGRLHELEL SVFSQAF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	753	764	KRRFKTLMLRKK
2	753	765	KRRFKTLMLRKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein