PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY57611.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB_related | ||||||||
Protein Properties | Length: 317aa MW: 34835.6 Da PI: 9.0709 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.8 | 2.2e-12 | 5 | 55 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 +++WT+eE+e l +v+++G+g Wk I r R+ ++k++w++ GAY57611.1 5 KQKWTAEEEEALRAGVAKHGTGKWKNIQRDPEfnpflFSRSNIDLKDKWRN 55 79*****************************9*9**989**********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 317 aa Download sequence |
MGNPKQKWTA EEEEALRAGV AKHGTGKWKN IQRDPEFNPF LFSRSNIDLK DKWRNMSVSA 60 PREKSRTLKP KAGSDAPAVP LSTPQTSALP AAVPIDASAD PITDESARSS APKKYITLYV 120 EVDSLSSKPF CSPVIDYTVD LLMMNIRLSA STSQRSRLYN ALIFEAISAL KEPNGSDVSA 180 ILSYIEQRLE VPPNFRRLLS SRLRRLVAQE KLEKVQNCFK VKEDASLGTK TPNPKQKDTR 240 PKLLHSTNDL SPADTVQEAA AAAAGQVADA ENKSFVAAEA VKEAERVSRM AEDTDSLLQL 300 AKEILERCSR GEIVVVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17520.1 | 2e-48 | MYB_related family protein |