PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY57175.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Protein Properties

Length: 462aa MW: 51767.9 Da PI: 6.7663

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY57175.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	103.2	1.4e-32	159	264	1	100
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelv 93 f+kv tpsdv+k++rlv+pk++ae++ ++++e++ l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ g+ +++l+ GAY57175.1 159 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGvGDlAKGRLF 257 89**************************66677899*********************************************666999** PP EEEE-SS CS B3 94 vkvfrks 100 + ++r+s GAY57175.1 258 IDWRRRS 264 **985 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MEFGSSSNSY SNRERLISEE DEMIGIDYEM GNIISNTGSN QAVKLHFSTT YASNSSSFPS 60 SASSHHHHYT TQTQQLLPLT THHQNYNKQQ QQPQMGSWLL GKTTTTTTAA ELEDVSNEEE 120 AAAPTEEQAI IMQETKDIIG EGEAEEDRVL ISLEKEHMFD KVVTPSDVGK LNRLVIPKQH 180 AEKYFPLDSS SNEKGLLLNF EDRNGKPWRF RYSYWNSSQS YVMTKGWSRF VKDKKLDAGD 240 VVSFHRGVGD LAKGRLFIDW RRRSHPPAAA AASFSRHLPF YRSIPWNPLL MMRPPVLPAS 300 MYSQSQINNN FYNRNSISLG GTGNNNNVLS TRTLGSILYL RSQLPAAPAT QQQPPPPPPH 360 TEIGMTKWQQ HPIVFDSVPV VQGKATAKRL RLFGVNMDCP ITESDDECHI LSSSTSIQHA 420 TMAIHDQPSQ LSSSSQLSLY DATPLLPPFD FLNKGKASMS FD

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MEFGSSSNSY SNRERLISEE DEMIGIDYEM GNIISNTGSN QAVKLHFSTT YASNSSSFPS  60
SASSHHHHYT TQTQQLLPLT THHQNYNKQQ QQPQMGSWLL GKTTTTTTAA ELEDVSNEEE  120
AAAPTEEQAI IMQETKDIIG EGEAEEDRVL ISLEKEHMFD KVVTPSDVGK LNRLVIPKQH  180
AEKYFPLDSS SNEKGLLLNF EDRNGKPWRF RYSYWNSSQS YVMTKGWSRF VKDKKLDAGD  240
VVSFHRGVGD LAKGRLFIDW RRRSHPPAAA AASFSRHLPF YRSIPWNPLL MMRPPVLPAS  300
MYSQSQINNN FYNRNSISLG GTGNNNNVLS TRTLGSILYL RSQLPAAPAT QQQPPPPPPH  360
TEIGMTKWQQ HPIVFDSVPV VQGKATAKRL RLFGVNMDCP ITESDDECHI LSSSTSIQHA  420
TMAIHDQPSQ LSSSSQLSLY DATPLLPPFD FLNKGKASMS FD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46870.1	3e-66	B3 family protein