PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY57063.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | GATA | ||||||||
Protein Properties | Length: 387aa MW: 42510.8 Da PI: 4.56 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 48.1 | 1.6e-15 | 207 | 243 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg ++ Tp +Rrgp g++tLCnaCGl+++ kg+ GAY57063.1 207 CQHCGISEklTPAMRRGPAGPRTLCNACGLMWANKGT 243 **********************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 387 aa Download sequence |
MFAMNPQPLQ ARPYIDTEEH DVAQTPIPIQ NGSKQGDRYD EPEEVEDEAG ASSVNRKSND 60 RGGSSVQSST STRTSELTVA YEGEVYVFPA VTPHKVQALL LLLGECDIPS TVPSSAFAQP 120 QNIMSGGSAS NGSKLSQRIA SLVRFREKRK ERSFEKKIRY SCRKEVAQRM QRKNGQFTSS 180 KATFNIASAN SNPSNGSAPP ESVSRICQHC GISEKLTPAM RRGPAGPRTL CNACGLMWAN 240 KGTLRDLTKG ARNICFEQHE LEKSSLMAIH NLQETSSDIK PATTEAENSY ANQDEQGSPH 300 ETKPAPLDPQ NHSMRSNEQY LLESDDGFAC PLPIQEDNSL MNLDDEDLQE AMDELANASG 360 SDFEIPSNFD EQVDVDDSNL GTDWLDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.1 | 8e-50 | GATA family protein |