PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY56808.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | WRKY | ||||||||
Protein Properties | Length: 599aa MW: 65128.9 Da PI: 6.9352 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.7 | 7.4e-31 | 328 | 386 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ GAY56808.1 328 NDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 386 8***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 599 aa Download sequence |
MAKGSGLSID HNISDPIAGK NKNFFLCHQP TVLNSFSDDH HHFHKFHYLM DAKRSPATTP 60 STIQFPVCLN HDEDSPQQSS DDHHHHNKRK VIDEMDFFTD KNTHSRDHHH YKDSKLELNV 120 NTGLNLLTTN TSSDHSTVDD GISTNMEDKK AKNEYAVVQA ELERVNAENQ RLKDMVNEVT 180 NNYNALQLQL MAFMQHHNAK AADENSDGRQ VEEKKGQLAA PRRFIDLGLG VNTAGTADEP 240 ALSSSEGRSR DLGGSPVNGN SNNNEESNVL FGQDKKEFVK RDDSPDRNYG PNKVPKFSSS 300 SKNVDQTEAT MRKARVSVRA RSEAPMINDG CQWRKYGQKM AKGNPCPRAY YRCTMAAGCP 360 VRKQVQRCAE DRTILITTYE GNHNHPLPPA AMAMASTTSS AARLLLSGSM SSADGLMNAN 420 FLARTLLPCS SSMATISASA PFPTVTLDLT QTPNPSNVQR SPNQFQVPFP NPSHNFANGA 480 AAAAAGSLLP QIFGQALYNQ SKFSGLQMSQ DMDPSQLGNQ SQLPSPAMQQ GQQHNSLADS 540 VSAATAAIAA DPNFTAALAA AITSIINGGT PQSNNVTNNE NTDDLATTTN GNVKFSQSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22070.1 | 1e-112 | WRKY family protein |