PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY56704.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 352aa MW: 40495.2 Da PI: 5.8613

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY56704.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22	2.7e-07	303	334	23	54
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp++e++++L +++gL+ +q+ +WF N+R + GAY56704.1 303 PYPTEEDKARLVQETGLQLKQINNWFINQRKR 334 8*****************************87 PP
2	ELK	29.1	2.2e-10	255	276	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ GAY56704.1 255 ELKHELKQGYKEKIVDIREEIL 276 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MAYNDQQNMQ RLVLPTTSTN PPPPTWLNNA VRHHHHQNDD DDEEEEAPKN NKNNTESNDN 60 GRAEDWETVK CKAEIVGHPL YEQLLSAHVS CLRIATPVDQ LPKIDAQLSR SRDVLAKYSA 120 VANGRVLDDK ELDQFMTHYV LLLYSFKEQL QQHVRVHAME AVMACWDLEQ SLQSLTEFRE 180 TSVETLVLFE HEKFHLCGVS PGESTGATMS DDDEDQVDSD TNFFDGSLDG PDSMGFGPLV 240 PTESERSLME RVRHELKHEL KQGYKEKIVD IREEILRKRR AGKLPGDTTS LLKAWWLSHA 300 KWPYPTEEDK ARLVQETGLQ LKQINNWFIN QRKRNWHANP SSSTASKSKR KR

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MAYNDQQNMQ RLVLPTTSTN PPPPTWLNNA VRHHHHQNDD DDEEEEAPKN NKNNTESNDN  60
GRAEDWETVK CKAEIVGHPL YEQLLSAHVS CLRIATPVDQ LPKIDAQLSR SRDVLAKYSA  120
VANGRVLDDK ELDQFMTHYV LLLYSFKEQL QQHVRVHAME AVMACWDLEQ SLQSLTEFRE  180
TSVETLVLFE HEKFHLCGVS PGESTGATMS DDDEDQVDSD TNFFDGSLDG PDSMGFGPLV  240
PTESERSLME RVRHELKHEL KQGYKEKIVD IREEILRKRR AGKLPGDTTS LLKAWWLSHA  300
KWPYPTEEDK ARLVQETGLQ LKQINNWFIN QRKRNWHANP SSSTASKSKR KR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	332	352	RKRNWHANPSSSTASKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-146	TALE family protein