PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY56661.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 208aa    MW: 23169.7 Da    PI: 8.6805
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY56661.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.4e-184089255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                 ykGVr++  +g+WvAeIr+p   + r +r +lg+f t  +Aa a+++a++kl+g
  GAY56661.1 40 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFNTSLDAALAYDEAARKLYG 89
                69****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MEKVSEAASL SQKGTKKPNM GRSRKGCMKG KGGPENVLCT YKGVRQRTWG KWVAEIREPN  60
RGARLWLGTF NTSLDAALAY DEAARKLYGD YAKLNLPQVQ QHNRPSSNNI NNNNHITASQ  120
VFTTDHIVPI QQQKQQQQQI ESSNESVGNS SRFGESSVPR HFTSWISGED NLYWPESLEA  180
NDSGVSLSDL MMGGNDLDWD GLQAPRSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18450.19e-47ERF family protein