PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY56194.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

HB-other

Protein Properties

Length: 1170aa MW: 132002 Da PI: 7.3883

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY56194.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	39	1.4e-12	7	55	8	56
-HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 8 tkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 t+ q ++L +++ +++yp+++e+e LA+ l+Lt +qV++WF +R ++k GAY56194.1 7 TPLQAKALLKFYSEEKYPTKSEMEGLAAALDLTYKQVRTWFIEKRRRDK 55 899******************************************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 1170 aa Download sequence
MEVKRKTPLQ AKALLKFYSE EKYPTKSEME GLAAALDLTY KQVRTWFIEK RRRDKGDNGI 60 VIPSSSSKKL KGFHGRNRLG VVSAKIVKKQ DSLIHNKHLS LMVCNGTGKK KNAVTVLQDL 120 LTPDYILKKV FRKDGPSLGV EFDSLPSKAF FHSKDSINSC PPLQENQTAK RKRKVSIHDE 180 LDHQECCTNT DHVRKHGMGK GLMTAWRVMN PNGGTVPTGI DVADRQVTVV PQMATPLSQK 240 PPLRKKRAQQ IVSLLKQRRL ANNLQNKRKP VAKGRQVKLD KGERLRQPNK EKCELAPDSV 300 ISQERLDQIA MLVDDEELEL RELEVGPNPP TCCDHISTKG LHGCSLCRGV LEFQYQESFV 360 IFPDLLAKFP PNSVKMKQPF GTQPWDSSPE TVKKLFKVFH FLCTYAGIVD ICSFTLDEFA 420 QAFHDKDSML LGKIHVALLK LLLSDVEMEL GRGCPPHLSV SCKFLALLHS VENQEFFVEF 480 WNKSLNPLTW TEILRQVLVA AGFGSKQGSS RKESLSKEMI LMLKYGLRPG TLKGELFRIL 540 LEQGNNGSKV CQLARSSQIA ELNLESTTEE VELLISSTLS SDITLFEKIA SSTYRLRINT 600 SKEADDFESD AEDIGSVDDN SDDDDTCSNR DDSECNSENQ RQRRPKYLNC RKSENNMLTV 660 YMEIDESHRG DVWLSGLMEG EYSDLTIDEK LNALVGLIDL VSAGSSIRME DPTKAIAESV 720 PSVRHYGSGA KIKRALPNQH SLPRPSWVHA GDFHGVRETN TSRELHPLDS FSLISKSCGK 780 EKSSSVKDAK ATEVSTDLHP MQSIYLGSDR RYNRYWLFLG PCNEYDPGHK RVYFESSEDG 840 HWEVIDTEEA LRALLSVLDD RGRQEALLIE SLEKREAFLC QAMSSGLVNN TEIRHVAQSD 900 QSELDIVRED SSSPVSDVDN NLALSEIGKE SLPSCGAIVL DVGKKGEEQH RMWSRLQEFD 960 AWIWNSFYLN LNAVKHGKRS YLDALARCER CHDLYWRDEK HCKICHTTFE LDFDLEERYA 1020 VHAATCRGKG DHLVSKHKIL SSQLQSLKAA VHAIESVMPE DALVGAWTKS AHKLWVKRLR 1080 RTSSLAELLQ VVADFVSAIN EGWLYQWNVQ IADTVMEEII AVFPTMPQTS SALALWLVKL 1140 DAIIAPYLER VNSGKEDARM RCRGKQALVQ

Sequence ? help Back to Top

Protein Sequence Length: 1170 aa Download sequence

MEVKRKTPLQ AKALLKFYSE EKYPTKSEME GLAAALDLTY KQVRTWFIEK RRRDKGDNGI  60
VIPSSSSKKL KGFHGRNRLG VVSAKIVKKQ DSLIHNKHLS LMVCNGTGKK KNAVTVLQDL  120
LTPDYILKKV FRKDGPSLGV EFDSLPSKAF FHSKDSINSC PPLQENQTAK RKRKVSIHDE  180
LDHQECCTNT DHVRKHGMGK GLMTAWRVMN PNGGTVPTGI DVADRQVTVV PQMATPLSQK  240
PPLRKKRAQQ IVSLLKQRRL ANNLQNKRKP VAKGRQVKLD KGERLRQPNK EKCELAPDSV  300
ISQERLDQIA MLVDDEELEL RELEVGPNPP TCCDHISTKG LHGCSLCRGV LEFQYQESFV  360
IFPDLLAKFP PNSVKMKQPF GTQPWDSSPE TVKKLFKVFH FLCTYAGIVD ICSFTLDEFA  420
QAFHDKDSML LGKIHVALLK LLLSDVEMEL GRGCPPHLSV SCKFLALLHS VENQEFFVEF  480
WNKSLNPLTW TEILRQVLVA AGFGSKQGSS RKESLSKEMI LMLKYGLRPG TLKGELFRIL  540
LEQGNNGSKV CQLARSSQIA ELNLESTTEE VELLISSTLS SDITLFEKIA SSTYRLRINT  600
SKEADDFESD AEDIGSVDDN SDDDDTCSNR DDSECNSENQ RQRRPKYLNC RKSENNMLTV  660
YMEIDESHRG DVWLSGLMEG EYSDLTIDEK LNALVGLIDL VSAGSSIRME DPTKAIAESV  720
PSVRHYGSGA KIKRALPNQH SLPRPSWVHA GDFHGVRETN TSRELHPLDS FSLISKSCGK  780
EKSSSVKDAK ATEVSTDLHP MQSIYLGSDR RYNRYWLFLG PCNEYDPGHK RVYFESSEDG  840
HWEVIDTEEA LRALLSVLDD RGRQEALLIE SLEKREAFLC QAMSSGLVNN TEIRHVAQSD  900
QSELDIVRED SSSPVSDVDN NLALSEIGKE SLPSCGAIVL DVGKKGEEQH RMWSRLQEFD  960
AWIWNSFYLN LNAVKHGKRS YLDALARCER CHDLYWRDEK HCKICHTTFE LDFDLEERYA  1020
VHAATCRGKG DHLVSKHKIL SSQLQSLKAA VHAIESVMPE DALVGAWTKS AHKLWVKRLR  1080
RTSSLAELLQ VVADFVSAIN EGWLYQWNVQ IADTVMEEII AVFPTMPQTS SALALWLVKL  1140
DAIIAPYLER VNSGKEDARM RCRGKQALVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	0.0	HB-other family protein