PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY55836.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 208aa    MW: 22679.4 Da    PI: 9.4125
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY55836.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.88.7e-212474256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +y+GVr ++ +gr++AeIrdp   gk++r++lg+f+taeeAa+a++aa+++++g+
  GAY55836.1 24 RYRGVRKRP-WGRYAAEIRDP---GKKTRVWLGTFDTAEEAARAYDAAAREFRGA 74
                59*******.**********8...557*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MAPRDKLNKP SSNPNPNSKD MEIRYRGVRK RPWGRYAAEI RDPGKKTRVW LGTFDTAEEA  60
ARAYDAAARE FRGAKAKTNF PTPNEILGTL ARSPSQSSTV ESSSPPPPTL LPQPQPLPQL  120
NLALNSYRNA GACLPVATAR PVLFFDVFSS GGTVATHRDA RCVGFYPGGT QSDSDSSSVV  180
VDYDPRSSER RLIDLDLDLN LPPPPEVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.11e-24ERF family protein