PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY55772.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bZIP

Protein Properties

Length: 458aa MW: 49535 Da PI: 6.4006

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY55772.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37.3	6.1e-12	249	297	10	58
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 + +NRe+ArrsR+RK+a + eLe+ + +L ae ++L k l ++++++ GAY55772.1 249 MLSNRESARRSRRRKQAHLNELETQAGQLRAEHSSLLKGLTDVNQKYDE 297 679**********************************999888888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MNSVFSADDF SDSFLSSPSP PPASFHALPM NRSQSEWELE KFLQEVTVSP RAISSSSASD 60 NSVPAVIGPS VMSKSRAYEI GDDDVVEIKK SHRDQSLDPP VIPSSTAPVD SDEYRAYLKT 120 KLDLACAAVA LRTAPVKPED KSSLIENQTQ AAKPSELGSQ AMATVNVSTA HDALGTHPKA 180 DFRPLGSADL PAVQARPAAQ VRQSTSGSSR EDSDDDELEG DTETVEGLDS VDDKRARRYT 240 TCIAYFHSML SNRESARRSR RRKQAHLNEL ETQAGQLRAE HSSLLKGLTD VNQKYDESAV 300 NNRILKADIE TLRAKVKMAE ETVKRVTGLN PLLLARSDVP GVGMPLVNVP LDASRNATHP 360 MQPNPNQFFH QAIPSISTPT PNHQSLDSSF PSNIQLPTVG NPQSDRGGKN MTETSPLQHA 420 VSLEHVPQGV GHRVSPPGAV PGWDTGLPHA GSKNNKQR

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MNSVFSADDF SDSFLSSPSP PPASFHALPM NRSQSEWELE KFLQEVTVSP RAISSSSASD  60
NSVPAVIGPS VMSKSRAYEI GDDDVVEIKK SHRDQSLDPP VIPSSTAPVD SDEYRAYLKT  120
KLDLACAAVA LRTAPVKPED KSSLIENQTQ AAKPSELGSQ AMATVNVSTA HDALGTHPKA  180
DFRPLGSADL PAVQARPAAQ VRQSTSGSSR EDSDDDELEG DTETVEGLDS VDDKRARRYT  240
TCIAYFHSML SNRESARRSR RRKQAHLNEL ETQAGQLRAE HSSLLKGLTD VNQKYDESAV  300
NNRILKADIE TLRAKVKMAE ETVKRVTGLN PLLLARSDVP GVGMPLVNVP LDASRNATHP  360
MQPNPNQFFH QAIPSISTPT PNHQSLDSSF PSNIQLPTVG NPQSDRGGKN MTETSPLQHA  420
VSLEHVPQGV GHRVSPPGAV PGWDTGLPHA GSKNNKQR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	257	264	RRSRRRKQ
2	259	264	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02640.2	4e-42	bZIP family protein