PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY55639.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB_related | ||||||||
Protein Properties | Length: 204aa MW: 23310.5 Da PI: 10.073 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.8 | 1.3e-13 | 72 | 118 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++WT++E+++++ + k lG+g+Wk I++ + ++Rt q+ s+ qky GAY55639.1 72 KLPWTEDEHQKFLMGLKWLGKGDWKGISKNFVTTRTQTQIASHAQKY 118 689*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MCRSKGCVKL FGVNILEQKQ DHESNRSSSV TSFANLHYLE EPNAQVNAES LCEGQQLNFK 60 RRKVVREKRK RKLPWTEDEH QKFLMGLKWL GKGDWKGISK NFVTTRTQTQ IASHAQKYFN 120 RQASSSDNKN RRTSLFDMPL KEAYQIHCNG RMPAGICDNF SPCAPQLFQR SISRETDILE 180 LKIGPPQSPE MNSSSSQIFG VAVV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 60 | 71 | KRRKVVREKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47390.1 | 4e-18 | MYB_related family protein |