PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY55615.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

VOZ

Protein Properties

Length: 474aa MW: 52416.8 Da PI: 5.8742

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY55615.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	406	7.8e-125	197	413	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdls 99 pppsaf+gpkcalwdctrpa gse ++dycs+fhatla+ e++pg+tpvlrp+gi+lkd+llf+a++a++qgk vgip+cegaat+kspwna+elfdl+ GAY55615.1 197 PPPSAFMGPKCALWDCTRPALGSELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPHCEGAATTKSPWNATELFDLA 295 89*********************************************************************************************** PP VOZ 100 llegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakg 198 llegetirewlffdk r+afesg rkqrslpd+sgrgwhesrk vmkefgg+krsyymdpqps+ +ewhlyeyei +da+alyrle+kl+ ekks+k GAY55615.1 296 LLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWHESRKLVMKEFGGQKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSPKV 394 *********************************************************************************************** PP VOZ 199 kvskdsladlqkklgrlta 217 kv+kdsladlqkk+grlta GAY55615.1 395 KVTKDSLADLQKKMGRLTA 413 ***************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MQSGSKSKCA SASHQFLLDS AKNRLNDLQE KFANLRVARK EGRANDVAVL EEQVNQILRE 60 WNSELSAPSP ASSLLGGSLG LFPNDIDRLL QLGDEQDDAT SPLAGFAEMK PQPDVQGHPG 120 TMMAFQEGHC FQGFDKCEDS ASGLHNPTVG ISGLTTQLDY SHLIFRQELE NLLLDGVNGT 180 EECEKDIGPN SLPIIHPPPS AFMGPKCALW DCTRPALGSE LFEDYCSNFH ATLAVSEDSP 240 GLTPVLRPGG INLKDSLLFN AVNARAQGKR VGIPHCEGAA TTKSPWNATE LFDLALLEGE 300 TIREWLFFDK HRKAFESGTR KQRSLPDHSG RGWHESRKLV MKEFGGQKRS YYMDPQPSDG 360 LEWHLYEYEI IGFDAYALYR LEVKLASEKK SPKVKVTKDS LADLQKKMGR LTADVPVDNK 420 SSFKGKIETN GKVDSATVNS SQNEMTSATE ILHHGSSSPY KYLADNSADY YHKY

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MQSGSKSKCA SASHQFLLDS AKNRLNDLQE KFANLRVARK EGRANDVAVL EEQVNQILRE  60
WNSELSAPSP ASSLLGGSLG LFPNDIDRLL QLGDEQDDAT SPLAGFAEMK PQPDVQGHPG  120
TMMAFQEGHC FQGFDKCEDS ASGLHNPTVG ISGLTTQLDY SHLIFRQELE NLLLDGVNGT  180
EECEKDIGPN SLPIIHPPPS AFMGPKCALW DCTRPALGSE LFEDYCSNFH ATLAVSEDSP  240
GLTPVLRPGG INLKDSLLFN AVNARAQGKR VGIPHCEGAA TTKSPWNATE LFDLALLEGE  300
TIREWLFFDK HRKAFESGTR KQRSLPDHSG RGWHESRKLV MKEFGGQKRS YYMDPQPSDG  360
LEWHLYEYEI IGFDAYALYR LEVKLASEKK SPKVKVTKDS LADLQKKMGR LTADVPVDNK  420
SSFKGKIETN GKVDSATVNS SQNEMTSATE ILHHGSSSPY KYLADNSADY YHKY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-157	VOZ family protein