PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY55480.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family WRKY
Protein Properties Length: 319aa    MW: 35428.5 Da    PI: 8.2708
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY55480.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.67.2e-30164223159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rs ed++v++ tYegeHnh+
  GAY55480.1 164 VKDGYQWRKYGQKVTRDNPSPRAYFKCSFApSCPVKKKVQRSVEDQSVLVATYEGEHNHP 223
                 58***************************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MDSFSWVDTS LDLNSNPLRL NDEVLAPAKK ELQGDFSGFG NKDSVKQETG ALVAELNRVS  60
AENKKLTETL TALCESYNAL RNQLMDYMSK NPEISKELFD SSSKKRKSES SNNNNNNVAL  120
TMGNSESSST DEESCKKPRE EHIKAKISRV HYRTEPSDTT SLVVKDGYQW RKYGQKVTRD  180
NPSPRAYFKC SFAPSCPVKK KVQRSVEDQS VLVATYEGEH NHPLPCHMDA ASGSTSRCVT  240
AGSVPCSTGQ TITLDLTRSN TKSSNEDKAL KPRIDTSPEV RNFLVEQMAS SLTKDPNFTT  300
ALAAAISGKI FQHNPREKW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.11e-97WRKY family protein