PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY55263.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family Nin-like
Protein Properties Length: 281aa    MW: 32339.3 Da    PI: 6.5193
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY55263.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK81.39.7e-26109158352
      RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 k +s e++s+yF++pi++AAkeL+v+lT+LK++CR+++I+RWPhRk+ sl
  GAY55263.1 109 KFLSRETISQYFYMPITKAAKELNVGLTLLKKRCRELNIRRWPHRKLMSL 158
                 66899******************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MDWPSEMAIQ QESYFDAIPL MGSVPDPLCA SQDIVPVPKM TQGDLFCACD YGTGIWSELG  60
PLIEQPTEKL AQAKAPLLLC EDQAPLQETK QQRKVTRRYK LEEKLRSSKF LSRETISQYF  120
YMPITKAAKE LNVGLTLLKK RCRELNIRRW PHRKLMSLQT LIKNVQELQT EGEGSEERLR  180
EALGILERER KLIEERPDLE MEDTTKRLRQ ACFKANYKKR KFMGTMMGPM VSTSSCSSRH  240
HHQVLLDADI AYDEYQITGN EDLEEMGSLF SCSSSNSIMM I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.13e-47Nin-like family protein