PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY54367.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 339aa MW: 38640.1 Da PI: 4.3714

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY54367.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.4	1.3e-09	268	302	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 + +yp+++++ +L+k++gL+++q+++WF N+R ++ GAY54367.1 268 RWPYPTEDDKLKLSKETGLDQKQISNWFINQRKRH 302 569*****************************885 PP
2	ELK	35.7	1.8e-12	222	243	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ++K +L+rKYsgyL++Lk+EF+ GAY54367.1 222 DIKGMLMRKYSGYLSNLKKEFL 243 58*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
WTVLIMEDLY KRLDDPAAAT VSYSSDDFLR VENFSLGNFT ANTTTAGELY NPPCVDSMLQ 60 FNSEITAAAG SDNISDDLIK ARIANHPRFP NLLSAYIDCQ KIGVPSEVAF LLEEICRENN 120 TTRCSSEIGA DPELDEFMES YSEVLRRYKE ELAKPFDEAT TFLSNIELQL SNLCNGEFTR 180 TLDYPSDEAA GTSEEELSYE EAEPLDCQDF LNASSGPADD QDIKGMLMRK YSGYLSNLKK 240 EFLKKKKKGK LPKDAKTTLM DWWNEHYRWP YPTEDDKLKL SKETGLDQKQ ISNWFINQRK 300 RHWKPSEDMR FALLEGATLG GNYSSNDRGP MFLNTPDFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	7e-75	TALE family protein