PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY54175.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

GeBP

Protein Properties

Length: 399aa MW: 43831.1 Da PI: 4.3628

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY54175.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	122.4	2.1e-38	123	218	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 lfqrlw++eDei lLqG++d+++++g ++d+ fy+++k++++++++k+qlveK+rrLKkK+++ ++k+ sgk++sf+++hdq +fe+s+kiW GAY54175.1 123 LFQRLWTDEDEIELLQGFLDYTTQRGNAHHHDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVMNKITSGKDFSFKTAHDQATFEISRKIWS 218 79*********************************************************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MASEQHDTVL PEEDQDLEED EESSEEDDLE ENDDVLPDEE EEDDEEDLNS ASTATVPSAA 60 AAETPTVTVA FPSSSASAAT VTLALPPAAI DETDPKRQRV AESVTVHEEK KPLPQQLDES 120 RRLFQRLWTD EDEIELLQGF LDYTTQRGNA HHHDTALFYD QIKSKLQLDF NKNQLVEKLR 180 RLKKKYRNVM NKITSGKDFS FKTAHDQATF EISRKIWSST PNVSVLDDED ANNSNNHLVI 240 SHEMRNNNNN NSNYNNNYGF VGGNANEEKV TPRPRKRSRS KAGGNDNVSS GTMNNCENMN 300 VNSGGGVGGE LLSNVMGGMG GRGIGGLAMN AIMPMGFGGA GIGMGMMGFG GSGVGGGSEV 360 VDEKWRKQQI LELEVYSKRL ELVQDQIKVA LEELRSMGG

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MASEQHDTVL PEEDQDLEED EESSEEDDLE ENDDVLPDEE EEDDEEDLNS ASTATVPSAA  60
AAETPTVTVA FPSSSASAAT VTLALPPAAI DETDPKRQRV AESVTVHEEK KPLPQQLDES  120
RRLFQRLWTD EDEIELLQGF LDYTTQRGNA HHHDTALFYD QIKSKLQLDF NKNQLVEKLR  180
RLKKKYRNVM NKITSGKDFS FKTAHDQATF EISRKIWSST PNVSVLDDED ANNSNNHLVI  240
SHEMRNNNNN NSNYNNNYGF VGGNANEEKV TPRPRKRSRS KAGGNDNVSS GTMNNCENMN  300
VNSGGGVGGE LLSNVMGGMG GRGIGGLAMN AIMPMGFGGA GIGMGMMGFG GSGVGGGSEV  360
VDEKWRKQQI LELEVYSKRL ELVQDQIKVA LEELRSMGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	6e-53	GeBP family protein