PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY53605.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | FAR1 | ||||||||
Protein Properties | Length: 171aa MW: 19365.4 Da PI: 8.4658 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 57 | 6.5e-18 | 34 | 118 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +++ Y+k+ GF v +++s+k g + tf C ++g++++++ k +++++ +tgC+a+l + +dgkw + +l+l+HnH+l GAY53605.1 34 YFKGYSKRKGFPVLRRTSRKD-SYGILRNVTFACGRSGETRSKSVK---ILKPQPNAKTGCNARLGAGLGDDGKWTIRSLNLDHNHALL 118 799*************99998.7888************99998766...99************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
MEKDIEIEEL EKIEEDDEPI IGMSFDSDTD LFIYFKGYSK RKGFPVLRRT SRKDSYGILR 60 NVTFACGRSG ETRSKSVKIL KPQPNAKTGC NARLGAGLGD DGKWTIRSLN LDHNHALLTP 120 TKSKQDKETE VVIKMLLELE VISYECSKIA AFLHHQPKVI IKAEVLVLIK Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76320.1 | 9e-12 | FAR1 family protein |