PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY53429.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 351aa    MW: 40188.9 Da    PI: 5.1666
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY53429.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.15.7e-15120168254
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                  ykGVr+++ +g++ AeIrd +     r  r +lg+f taeeA  a+ + + ++e
  GAY53429.1 120 IYKGVRRRP-WGKYSAEIRDpF-----RrVRLWLGTFNTAEEASSAYQKKKHEFE 168
                 69*******.**********66.....45******************98887765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MPSLQRQILG EEDLNDSKSK KMPKREGKNL SSMRKVRIIY HDPEATDSSS EEDECYDRKR  60
TQFPGAKRCI REISLPDFPS ETSEETALQL NDDQSKHDVD IKFDKNKKNE SKKTQRSSTI  120
YKGVRRRPWG KYSAEIRDPF RRVRLWLGTF NTAEEASSAY QKKKHEFESM CEGDLKKDKN  180
LSISPTVVVY ERTGGDNTSG SLSPLSPSSV LDVGTSIRLG NELESPIKKE DACKEKFHDK  240
CNVEKVAKDH NIEKIEEICN VEQHLKEEQP ISYLLEAPYL SPSVTKELGL LDPYTQFQAD  300
FAHYYDGFDY SFSEDPSVCE SEISKVTGLS KFDHMLEDFA WADATLDLTC F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.13e-24ERF family protein