PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY53285.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 422aa    MW: 46108.7 Da    PI: 9.3059
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY53285.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.46.2e-172473255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ GVr+++ +grWvAeI+d +   +r r +lg+++ +e+Aa a+++a+ +l+g
  GAY53285.1 24 RFVGVRQRP-SGRWVAEIKDST---QRVRLWLGTYDRPEDAALAYDEAACALRG 73
                789******.7*********43...36*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    
MAASVDHSAC ETDNPLLRLR PKKRFVGVRQ RPSGRWVAEI KDSTQRVRLW LGTYDRPEDA  60
ALAYDEAACA LRGPRARLNF PRLLNQVPAD AVRKKRYQPI SGEAAFRSWL LEKSSWYGGG  120
HQVSICEKRS LVGDSSRKLQ LRELFSPADI NEPADSFRKK IKPFYAGSHS EFQSMRPYDG  180
QTVFTSWHFG ESSQHQRGTG KISICKKKCL DGESVLLKAK GLADVRKKVQ AICGGCPLEF  240
VCAPPATSFS IRQGEESPQE HMIIQVDHDS ASSIKLASTS LNENASSSAS DHQSVRASAL  300
PEDRDIETRA ALSRAQSMSE KLPFDVNKLN KIILLLSTEE CLALLAILFS GGSSLSTNAR  360
ILMRGAGICS AVGFYSSLGS SVLKYIGKAE QTAPFLTAVG CVAAACGFTS VSCLFLPDKL  420
RA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.15e-15ERF family protein