PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY53105.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

SAP

Protein Properties

Length: 169aa MW: 19248.8 Da PI: 5.0724

Description

SAP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY53105.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SAP	202.3	2.5e-62	1	169	293	454
SAP 293 mGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrG.......vatvrrvenleevcrfrvrg 384 mGW mlte+te+vGrvrvt++e+avaCts+r+++fdlrnqg+vl+e+ rG+ v+s+d+++eay+vv++r a+vrrv+++eevcrf++r+ GAY53105.1 1 MGWRMLTEFTEFVGRVRVTSHESAVACTSSRVITFDLRNQGMVLGERGYGRGIYVTSVDVNAEAYIVVENRElenqnrrLAIVRRVDTFEEVCRFSLRA 99 8*****************************************************************97642222222799************9 PP SAP 385 .aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervg.evnalvaddrhvavsssdgtihlldfga 454 + +v+gC+n+gyal++ gv+rvWe+e e y+ys+rer+g ev a+v ddrhva+s ++ihl+dfga GAY53105.1 100 dRNVNVMGCMNQGYALMCVEGVIRVWEVEGGE-YMYSFRERIGeEVIAFVGDDRHVAASC-GTNIHLWDFGA 169 88899********************966.******899******9876.689****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 169 aa Download sequence
MGWRMLTEFT EFVGRVRVTS HESAVACTSS RVITFDLRNQ GMVLGERGYG RGIYVTSVDV 60 NAEAYIVVEN RELENQNRRL AIVRRVDTFE EVCRFSLRAD RNVNVMGCMN QGYALMCVEG 120 VIRVWEVEGG EYMYSFRERI GEEVIAFVGD DRHVAASCGT NIHLWDFGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35770.1	2e-48	SAP family protein