PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY53068.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 279aa    MW: 30883.2 Da    PI: 9.3634
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY53068.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.0002297119123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C + F ++  L  H++ H
  GAY53068.1  97 FSCNYCQRKFYSSQALGGHQNAH 119
                 89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MEPPKSEPSE TSSFISVSNA AHSCIIKPSE KEGQKVQRQN TNPALVLDLS LSNKDSNRGS  60
KPELNLIDCF KSTDSSQDSL ENNDIHRQGN ETEPRVFSCN YCQRKFYSSQ ALGGHQNAHK  120
RERTLAKRGQ RISTPSSSSS LAFGHHHNPN SYTHRSYPSL ASLPLHGSFN RSLGIQVHSM  180
IHKPSFIPST INSSYSYSQN GWPRQPIDQQ PAIGKLSQEN FQANAAAGSS SINGVSKFEN  240
VKKFSPVTEG NIGGYWCDFV SPFKTKQDDL QKLDLSLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.11e-43C2H2 family protein