PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY52926.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB

Protein Properties

Length: 231aa MW: 26160.9 Da PI: 7.2595

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY52926.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.6	3.9e-10	17	60	3	44
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 +WT eEd+l+ +a ++ + +W++Iar ++ g++ +++ r+ GAY52926.1 17 SWTREEDKLFERALVTFPEEtpgRWERIARQVP-GKSSVDVQRRY 60 7***************99*********.********9 PP
2	Myb_DNA-binding	43	1.1e-13	116	160	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + +++G+g+W++I+r Rt+ q+ s+ qky GAY52926.1 116 PWTAEEHRLFLIGLEKYGKGDWRSISRNAVVSRTPTQVASHAQKY 160 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MIHNKIDYSH SASTSSSWTR EEDKLFERAL VTFPEETPGR WERIARQVPG KSSVDVQRRY 60 DDLVLDLRKI EAGLVELPGY EDEMDSPGRV AESGASLGNN SNRSRERETE RRKGVPWTAE 120 EHRLFLIGLE KYGKGDWRSI SRNAVVSRTP TQVASHAQKY FLRMNSVRKD KKRSSIHDIT 180 TVDAGSSSQS YDPSWVGPLT DQLETHQLGS PSDFNDQGRS IGGYHSFGFP M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	2e-61	MYB family protein