PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY52869.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GATA
Protein Properties Length: 316aa    MW: 35261.1 Da    PI: 5.7903
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY52869.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.54.2e-19235268134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 Cs+C+t kTp+WR gp g+ktLCnaCG++y++ +
  GAY52869.1 235 CSHCQTQKTPQWRTGPLGPKTLCNACGVRYKSGR 268
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MEFCMEARAF KPSLRRELSC CLKSTQQVFF DDIPCVSNED FSVDDLLDFS NGDFEDGSVD  60
DKDYFSSPDP VDDDNNSNSG SFSSEQSLLT NEFVEPVDDF AELEWVSQFV DDSSCSELSL  120
LYPNYVERTR SEPNGKPVSN KTSTNPTTTT SPCFPLRVPS KARTKRTRRS GRAWSSGSPL  180
STESTISSSS STSCLIFTDS VQNIEWFSGF DEPVVKKPKK KPAVQSGGGL FQRRCSHCQT  240
QKTPQWRTGP LGPKTLCNAC GVRYKSGRLF PEYRPACSPT FSVDMHSNSH RKVLEMRRKK  300
ESAGPDVGLS HMVQSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1215222VKKPKKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.23e-49GATA family protein