PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY52800.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 480aa    MW: 54682.3 Da    PI: 4.2573
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY52800.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.11.7e-07320368247
                      SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 
                      ++WT+eE+ ++ ++v  ++       W+  +  ++  Rt ++++s+++++
       GAY52800.1 320 KNWTKEEENKFHEVVSSYPVSmgknFWDHLSLVFP-SRTKNELVSYYFNV 368
                      68***************98878888**********.***********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    
MLCAETRYYI ENLLSSIVGN YKVIFFKLQI YKALDLISES FENNCDFQGE MIHKRPFLDE  60
DCFEFPCKHP KQWECTNYLA PMVHMSPPAD GHQKPQTSDG DGEQNINRCR DQGRFLFGPV  120
AEVSNGTEKE FEIGSDCISP LFWANGLFAE GDANSEEVYL SLFPEYFATE HQIRTFLQSD  180
EIYSSHLDHP PVKSVSIGPE YQADVPEWCL QGSKNSLAHL DGSDHQVRLE RLSGSCLVVD  240
DVQGEKLLGT CVVSMPDSAP SANYYSQSLV TRNDCECLDK GSIRCVRQHV MEAREKLRVN  300
LGHKIFEELG FHEMGEEVSK NWTKEEENKF HEVVSSYPVS MGKNFWDHLS LVFPSRTKNE  360
LVSYYFNVFI LQKRAEQNRF DPLNIDSDDD EWQRCDLGAA EEDEESGVEF LSNRGVSAYQ  420
QDDHVENCQD DTEGGYLIDD CKNDANVVHT VATDEEEDGD VDDVPEPHVR DLFSHSSTDT