PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY52722.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Dof

Protein Properties

Length: 495aa MW: 54119.1 Da PI: 7.2375

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY52722.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.2	9.9e-40	134	194	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s GAY52722.1 134 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSA 194 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MAEPKDQGIK LFGRTIPLPE VTPSVGAAPS VDDRIDQDPT CSTNSSRESD KSRDGEERDS 60 EKEMSVDKPV ETKQEDEAPP ENSEESTNPG STSGISENPK ALPVEKECTT VKTSKTEEEQ 120 SEPSTSQEKT LKKPDKILPC PRCNSMDTKF CYYNNYNVNQ PRHFCKNCQR YWTAGGTMRN 180 VPVGAGRRKN KNSASHYRHI TVSEALQNVR TDVPNGVHHP ALKTNGTVLT FGSDAPLCES 240 MASVLNIADK TMRNCTRNGF HKPEELRIRL TYRGGENGDN YAHGSPVPVS NSKDEAGKTT 300 SQEAVVQNCQ GFPPHVACFP GAPWPYPWNS AQWSPPVTPP AILPPGFPMP FYPPAAYWGC 360 TVPGAWNIPW IPQPTSPKTP SSAPNSPTLG KHSREESLVK ASNSEGQEQH KENNAERCLW 420 VPKTLRIDDP GDAAKSSIWT TLGIKNDKAD SIGRGGLFKA FQQKNDGRGH IAGTSPVLQA 480 NPAALSRSLN FQESS

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MAEPKDQGIK LFGRTIPLPE VTPSVGAAPS VDDRIDQDPT CSTNSSRESD KSRDGEERDS  60
EKEMSVDKPV ETKQEDEAPP ENSEESTNPG STSGISENPK ALPVEKECTT VKTSKTEEEQ  120
SEPSTSQEKT LKKPDKILPC PRCNSMDTKF CYYNNYNVNQ PRHFCKNCQR YWTAGGTMRN  180
VPVGAGRRKN KNSASHYRHI TVSEALQNVR TDVPNGVHHP ALKTNGTVLT FGSDAPLCES  240
MASVLNIADK TMRNCTRNGF HKPEELRIRL TYRGGENGDN YAHGSPVPVS NSKDEAGKTT  300
SQEAVVQNCQ GFPPHVACFP GAPWPYPWNS AQWSPPVTPP AILPPGFPMP FYPPAAYWGC  360
TVPGAWNIPW IPQPTSPKTP SSAPNSPTLG KHSREESLVK ASNSEGQEQH KENNAERCLW  420
VPKTLRIDDP GDAAKSSIWT TLGIKNDKAD SIGRGGLFKA FQQKNDGRGH IAGTSPVLQA  480
NPAALSRSLN FQESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-110	Dof family protein