PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY52601.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 232aa    MW: 25907.8 Da    PI: 9.3841
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY52601.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.4e-056688123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C++ F++   L  H+++H
  GAY52601.1 66 YTCSFCKREFRSAQALGGHMNVH 88
                9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MERNIMSNSL KDHKIGSRFT RDSISNCNGY NNQNSGNKMK DSCQQRQQQS YGEEYLSGFS  60
WPPRSYTCSF CKREFRSAQA LGGHMNVHRR DRARLRISPP TPKDIIVNNN INNGQYPLLN  120
LNLNPNPNPN PNPNFSTPPL VSPFSSFSSQ SSASSSEIKK WSALTGALSP KDSVKKNEKS  180
FSGAKEFGGF TEEDDGFKLS KKGGEIVRLD LEIGVISDSK EDLDLELRLG YS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.16e-27C2H2 family protein