PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY52600.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 212aa    MW: 23703.3 Da    PI: 6.6773
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY52600.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.80.000183254123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C++ F++   L  H++ H
  GAY52600.1 32 YECTFCKRGFTNAQALGGHMNIH 54
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MDSSQKQVGS DHSSSDENEV KELDTSSAKR SYECTFCKRG FTNAQALGGH MNIHRKDRAK  60
AKQTTGPSFI TSNPMLIHED YMNPRYIAPI SSDTSRHSPV FESQRNYLRY YQPSASSPRN  120
PPAYNVPRSE SLSMMNEDQL LGANLSLGIG PSCVDEDNEV MRRGTVEEAG LDLELRLGRN  180
SFNKEEISGL AFERGRVNPR LLGDVLTFFS KS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.13e-15C2H2 family protein