PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY52449.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Dof

Protein Properties

Length: 366aa MW: 39183.3 Da PI: 9.1537

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY52449.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.5	7e-39	85	144	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk+ss GAY52449.1 85 NQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKSSS 144 68899****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MIQELLGAAG FISGDRKISI TGSIFEGTTS PLPPCTTTTT ATVTTTTATA APPPPPPPLP 60 TTTTSNTDSN IGNNTNNTSS NSGNNQNLRC PRCDSSNTKF CYYNNYNLTQ PRHFCKTCRR 120 YWTKGGALRN VPIGGGCRKN KSSSTVSAAS FGKSSSSSSA ANKMKTVAYE IGRGGFVHHP 180 HEYYSSTPIM WNNSPHNSQL LALLRTSQNP NINPTGPSTS TSSVRVKEEQ GVIGTHHVIK 240 GEPVGDTAAV LNSGTMVFNP LSQQLQVPSQ FGLWKNNQHQ IQAPQQNGFL VGHEVQNSGV 300 QELYQRFKSS TNNYYADHLA SPVVLSNAAS STTTILESAP VAGGELGYWN PVFSWSDLST 360 TNGSYP

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MIQELLGAAG FISGDRKISI TGSIFEGTTS PLPPCTTTTT ATVTTTTATA APPPPPPPLP  60
TTTTSNTDSN IGNNTNNTSS NSGNNQNLRC PRCDSSNTKF CYYNNYNLTQ PRHFCKTCRR  120
YWTKGGALRN VPIGGGCRKN KSSSTVSAAS FGKSSSSSSA ANKMKTVAYE IGRGGFVHHP  180
HEYYSSTPIM WNNSPHNSQL LALLRTSQNP NINPTGPSTS TSSVRVKEEQ GVIGTHHVIK  240
GEPVGDTAAV LNSGTMVFNP LSQQLQVPSQ FGLWKNNQHQ IQAPQQNGFL VGHEVQNSGV  300
QELYQRFKSS TNNYYADHLA SPVVLSNAAS STTTILESAP VAGGELGYWN PVFSWSDLST  360
TNGSYP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07640.1	1e-32	Dof family protein