PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY52271.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 599aa MW: 67049.7 Da PI: 9.6515

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY52271.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	31.5	3e-10	421	458	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +e+ ++yp+ ++++ LAk++gL+++qV++WF N R + GAY52271.1 421 YENflHPYPTDSDKQILAKQTGLSKNQVSNWFINARVR 458 554559******************************88 PP
2	BELL	94.2	1.2e-30	293	363	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 r e k +kL+ +leeV+ +Yk y++q+q v++sFe+vaglg+a+pY+s+A kaiS+hF cLk+ai +qi GAY52271.1 293 RIERSWKTSKLVLMLEEVYWKYKLYCQQMQSVVASFETVAGLGHAAPYISFAFKAISKHFCCLKNAILDQI 363 678889***************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 599 aa Download sequence
MAQASTSSVK QGATMNRKVG NNFRIPPASI YSLGAVANLL TGNERGIKIL QRIGIGMGFS 60 VLAMTVAAFV ESKGLKIVPK EIIHGGKRGP LSMIVFCLVP QHLILGSEDG FTLVGLQEYF 120 YAQVPASMRN LSYLNSFLII IRRFTTTTQT NQQEQPQPTS HIFQTNLTSF LQLNPPTKPP 180 PASSSSSSLQ SLHQTNFYTP FDPFPLNMHA QAQHYYSGFA DSLKLQKSEV RSSVPWGPFT 240 GYASILKRSR FLKPAQRILD EFCGTLYFDS SGSQVDSFCE NPVVRDFIAF SDRIERSWKT 300 SKLVLMLEEV YWKYKLYCQQ MQSVVASFET VAGLGHAAPY ISFAFKAISK HFCCLKNAIL 360 DQIHVSGSKT VSDKNANNDT TEPGCSSHKP VQKLGFLRPP HWRSQRALPD HAVAVLKTWL 420 YENFLHPYPT DSDKQILAKQ TGLSKNQVSN WFINARVRLW KPMVEEVHML EIGQTQTTAE 480 ATNSNFGVPS DHLNTLFPEK LYQATQILQA EHVPTKHCRN KRAQAPEQNE EQKNACLSNL 540 PSDQHIGFSG SSGVTLALAL NQNDGNDLSR PFPLKQIRKL LVNHKISILD KDFKEHLMP

Sequence ? help Back to Top

Protein Sequence Length: 599 aa Download sequence

MAQASTSSVK QGATMNRKVG NNFRIPPASI YSLGAVANLL TGNERGIKIL QRIGIGMGFS  60
VLAMTVAAFV ESKGLKIVPK EIIHGGKRGP LSMIVFCLVP QHLILGSEDG FTLVGLQEYF  120
YAQVPASMRN LSYLNSFLII IRRFTTTTQT NQQEQPQPTS HIFQTNLTSF LQLNPPTKPP  180
PASSSSSSLQ SLHQTNFYTP FDPFPLNMHA QAQHYYSGFA DSLKLQKSEV RSSVPWGPFT  240
GYASILKRSR FLKPAQRILD EFCGTLYFDS SGSQVDSFCE NPVVRDFIAF SDRIERSWKT  300
SKLVLMLEEV YWKYKLYCQQ MQSVVASFET VAGLGHAAPY ISFAFKAISK HFCCLKNAIL  360
DQIHVSGSKT VSDKNANNDT TEPGCSSHKP VQKLGFLRPP HWRSQRALPD HAVAVLKTWL  420
YENFLHPYPT DSDKQILAKQ TGLSKNQVSN WFINARVRLW KPMVEEVHML EIGQTQTTAE  480
ATNSNFGVPS DHLNTLFPEK LYQATQILQA EHVPTKHCRN KRAQAPEQNE EQKNACLSNL  540
PSDQHIGFSG SSGVTLALAL NQNDGNDLSR PFPLKQIRKL LVNHKISILD KDFKEHLMP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	8e-77	TALE family protein