PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY52270.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 607aa MW: 68041.9 Da PI: 9.6285

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY52270.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	31.5	3.1e-10	429	466	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +e+ ++yp+ ++++ LAk++gL+++qV++WF N R + GAY52270.1 429 YENflHPYPTDSDKQILAKQTGLSKNQVSNWFINARVR 466 554559******************************88 PP
2	BELL	94.1	1.2e-30	301	371	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 r e k +kL+ +leeV+ +Yk y++q+q v++sFe+vaglg+a+pY+s+A kaiS+hF cLk+ai +qi GAY52270.1 301 RIERSWKTSKLVLMLEEVYWKYKLYCQQMQSVVASFETVAGLGHAAPYISFAFKAISKHFCCLKNAILDQI 371 678889***************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 607 aa Download sequence
MAQASTSSVK QGATMNRKVG NNFRIPPASI YSLGAVANLV LIIFYDKLTG NERGIKILQR 60 IGIGMGFSVL AMTVAAFVES KGLKIVPKEI IHGGKRGPLS MIVFCLVPQH LILGSEDGFT 120 LVGLQEYFYA QVPASMRNLS YLNSFLIIIR RFTTTTQTNQ QEQPQPTSHI FQTNLTSFLQ 180 LNPPTKPPPA SSSSSSLQSL HQTNFYTPFD PFPLNMHAQA QHYYSGFADS LKLQKSEVRS 240 SVPWGPFTGY ASILKRSRFL KPAQRILDEF CGTLYFDSSG SQVDSFCENP VVRDFIAFSD 300 RIERSWKTSK LVLMLEEVYW KYKLYCQQMQ SVVASFETVA GLGHAAPYIS FAFKAISKHF 360 CCLKNAILDQ IHVSGSKTVS DKNANNDTTE PGCSSHKPVQ KLGFLRPPHW RSQRALPDHA 420 VAVLKTWLYE NFLHPYPTDS DKQILAKQTG LSKNQVSNWF INARVRLWKP MVEEVHMLEI 480 GQTQTTAEAT NSNFGVPSDH LNTLFPEKLY QATQILQAEH VPTKHCRNKR AQAPEQNEEQ 540 KNACLSNLPS DQHIGFSGSS GVTLALALNQ NDGNDLSRPF PLKQIRKLLV NHKISILDKD 600 FKEHLMP

Sequence ? help Back to Top

Protein Sequence Length: 607 aa Download sequence

MAQASTSSVK QGATMNRKVG NNFRIPPASI YSLGAVANLV LIIFYDKLTG NERGIKILQR  60
IGIGMGFSVL AMTVAAFVES KGLKIVPKEI IHGGKRGPLS MIVFCLVPQH LILGSEDGFT  120
LVGLQEYFYA QVPASMRNLS YLNSFLIIIR RFTTTTQTNQ QEQPQPTSHI FQTNLTSFLQ  180
LNPPTKPPPA SSSSSSLQSL HQTNFYTPFD PFPLNMHAQA QHYYSGFADS LKLQKSEVRS  240
SVPWGPFTGY ASILKRSRFL KPAQRILDEF CGTLYFDSSG SQVDSFCENP VVRDFIAFSD  300
RIERSWKTSK LVLMLEEVYW KYKLYCQQMQ SVVASFETVA GLGHAAPYIS FAFKAISKHF  360
CCLKNAILDQ IHVSGSKTVS DKNANNDTTE PGCSSHKPVQ KLGFLRPPHW RSQRALPDHA  420
VAVLKTWLYE NFLHPYPTDS DKQILAKQTG LSKNQVSNWF INARVRLWKP MVEEVHMLEI  480
GQTQTTAEAT NSNFGVPSDH LNTLFPEKLY QATQILQAEH VPTKHCRNKR AQAPEQNEEQ  540
KNACLSNLPS DQHIGFSGSS GVTLALALNQ NDGNDLSRPF PLKQIRKLLV NHKISILDKD  600
FKEHLMP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	1e-76	TALE family protein