PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY52269.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 446aa MW: 49964.3 Da PI: 9.6971

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY52269.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	32	2e-10	268	305	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +e+ ++yp+ ++++ LAk++gL+++qV++WF N R + GAY52269.1 268 YENflHPYPTDSDKQILAKQTGLSKNQVSNWFINARVR 305 554559******************************88 PP
2	BELL	94.8	7.9e-31	140	210	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 r e k +kL+ +leeV+ +Yk y++q+q v++sFe+vaglg+a+pY+s+A kaiS+hF cLk+ai +qi GAY52269.1 140 RIERSWKTSKLVLMLEEVYWKYKLYCQQMQSVVASFETVAGLGHAAPYISFAFKAISKHFCCLKNAILDQI 210 678889***************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MAQASTSSVK QGATMNRKVG NNFRIPPASI YSLGAVANLV LIIFYDKRIG IGMGFSVLAM 60 TVAAFVESKG LKIKSEVRSS VPWGPFTGYA SILKRSRFLK PAQRILDEFC GTLYFDSSGS 120 QVDSFCENPV VRDFIAFSDR IERSWKTSKL VLMLEEVYWK YKLYCQQMQS VVASFETVAG 180 LGHAAPYISF AFKAISKHFC CLKNAILDQI HVSGSKTVSD KNANNDTTEP GCSSHKPVQK 240 LGFLRPPHWR SQRALPDHAV AVLKTWLYEN FLHPYPTDSD KQILAKQTGL SKNQVSNWFI 300 NARVRLWKPM VEEVHMLEIG QTQTTAEATN SNFGVPSDHL NTLFPEKLYQ ATQILQAEHV 360 PTKHCRNKRA QAPEQNEEQK NACLSNLPSD QHIGFSGSSG VTLALALNQN DGNDLSRPFP 420 LKQIRKLLVN HKISILDKDF KEHLMP

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MAQASTSSVK QGATMNRKVG NNFRIPPASI YSLGAVANLV LIIFYDKRIG IGMGFSVLAM  60
TVAAFVESKG LKIKSEVRSS VPWGPFTGYA SILKRSRFLK PAQRILDEFC GTLYFDSSGS  120
QVDSFCENPV VRDFIAFSDR IERSWKTSKL VLMLEEVYWK YKLYCQQMQS VVASFETVAG  180
LGHAAPYISF AFKAISKHFC CLKNAILDQI HVSGSKTVSD KNANNDTTEP GCSSHKPVQK  240
LGFLRPPHWR SQRALPDHAV AVLKTWLYEN FLHPYPTDSD KQILAKQTGL SKNQVSNWFI  300
NARVRLWKPM VEEVHMLEIG QTQTTAEATN SNFGVPSDHL NTLFPEKLYQ ATQILQAEHV  360
PTKHCRNKRA QAPEQNEEQK NACLSNLPSD QHIGFSGSSG VTLALALNQN DGNDLSRPFP  420
LKQIRKLLVN HKISILDKDF KEHLMP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	7e-79	TALE family protein