PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY52024.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB
Protein Properties Length: 331aa    MW: 37472.4 Da    PI: 9.6738
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY52024.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding574.3e-182267147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ede+l ++v+q+G  +W++Ia++++ gR++k+c++rw++ 
       GAY52024.1 22 RGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ-GRSGKSCRLRWFNQ 67
                     899*****************************.***********996 PP
2Myb_DNA-binding58.51.5e-1874117146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r ++T++E+e+l+ a++ +G++ W++Iar ++ gRt++ +k++w+ 
       GAY52024.1  74 RRPFTEDEEERLLAAHRIHGNK-WALIARLFP-GRTDNAVKNHWHV 117
                      679*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MEDSGAGSSD DATKSSTSTC PRGHWRPAED EKLRQLVEQY GAQNWNSIAE KLQGRSGKSC  60
RLRWFNQLDP RINRRPFTED EEERLLAAHR IHGNKWALIA RLFPGRTDNA VKNHWHVIMA  120
RKQREQSKLC GKRSHQDTGN IISDQNFIHA RRSRSQDAML SSKFGFDQNS RIFEFRNPNH  180
DRTFAVSPPP SSSLTWAFGA APIVTSSNNS SVDLSRREAG DFFNTSTKVS DQHPYRSCYP  240
NSSAYGSYRG SSSFGVTNYR RFVPSPFGYV KVGDDYESHG VIKKEVIKFS DNSPSHLNLR  300
LSTQQAQADD QSIKHHEEVP FIDFLGVGIT S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.18e-67MYB family protein