PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY51866.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 690aa    MW: 79828.5 Da    PI: 9.3924
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY51866.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.12e-1522113199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 ffkv +ps  + ++ l++p  fa ++g++   +   tl+ ++gr+ +v l  +k ++ +++++GW eFv+ + +  g f+vFk++++s+f  +v++f++
  GAY51866.1  22 FFKVILPSPPGDKK-LMIPPLFAIKFGHE--LTNAATLTLPNGRQSQVSL--KKDGRNVWFRDGWHEFVEIHSITPGYFLVFKYEKNSRF--RVHIFDT 113
                 899999****9998.***********966..667899999**********..999999**************************999999..9999997 PP
2B344.72.5e-143524311093
                 HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 + + + + +p +f+ ++g +   s   tl++++g +++v +  ++k+g++++ +GW++Fv+++ +++g fv+F++ ++s+f+ +
  GAY51866.1 352 TIEDKKMKIPQNFVGRFGDE--LSNVATLTNPEGYVMRVGI--TRKDGKIWFDDGWNDFVEDHSIDVGYFVLFQYRKNSKFRVF 431
                 4566779*******999855..8889***************..********************************999999544 PP
3B349.76.7e-16592672490
                 E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
          B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                 v++++++++++ +++p +fa+++ + +e+   +t++d++gr+  vk+  ++++++y+lt GW +F k  ++kegD++ F++++ ++ 
  GAY51866.1 592 VFLRASNMQLNYVYVPTSFARKYLNGEEC---VTVQDSDGRKLAVKV--KQSRRKYLLT-GWGKFFKKANVKEGDILFFEMIQMKKI 672
                 566788999999***********544556...***************..9999999999.********************9874444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 690 aa     Download sequence    
MASSKIVKPK VSSSMLESPF HFFKVILPSP PGDKKLMIPP LFAIKFGHEL TNAATLTLPN  60
GRQSQVSLKK DGRNVWFRDG WHEFVEIHSI TPGYFLVFKY EKNSRFRVHI FDTTACEIKY  120
PCMSEESENV KDEMVDSEDC VEISKRLFAQ KSSKWNCKFG ASLENSKVKY KCDPGSKKRK  180
KEELAEKNES DELDLCDSLG EMGIYVSKRR RISAEGRKRA IRIATLLKLK NPTFMVILLP  240
RDKHCARIPK NFVKRFGHEL YNAANGTSNI WFHHGWYDFI KSYSISAGYF GVFNYVKSTT  300
FHALILDVTA CEINYPYESD ESKNEERRAE HKMPSSMKKT YPHFIDVILD STIEDKKMKI  360
PQNFVGRFGD ELSNVATLTN PEGYVMRVGI TRKDGKIWFD DGWNDFVEDH SIDVGYFVLF  420
QYRKNSKFRV FIYNTTTCEI QYPSRNTFPP PRQNQATFDS SKSKNGCEMR GKTYRMEEVK  480
VKEESDNVND SMQDVIGTCN SEGSVHAKIH LSETQCSSVQ ETDLKIDSTK FKKAKHNLKD  540
ELRADSVDQV KLFALLEDMD IHICESRMTL EERQEAINVA RLLKPEKPSF LVFLRASNMQ  600
LNYVYVPTSF ARKYLNGEEC VTVQDSDGRK LAVKVKQSRR KYLLTGWGKF FKKANVKEGD  660
ILFFEMIQMK KILLKVSRFS KIKRESYEPT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177181KKRKK
2208212KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-43B3 family protein