PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY51865.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 702aa    MW: 81236.2 Da    PI: 9.4461
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY51865.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.12.1e-1522113199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 ffkv +ps  + ++ l++p  fa ++g++   +   tl+ ++gr+ +v l  +k ++ +++++GW eFv+ + +  g f+vFk++++s+f  +v++f++
  GAY51865.1  22 FFKVILPSPPGDKK-LMIPPLFAIKFGHE--LTNAATLTLPNGRQSQVSL--KKDGRNVWFRDGWHEFVEIHSITPGYFLVFKYEKNSRF--RVHIFDT 113
                 899999****9998.***********966..667899999**********..999999**************************999999..9999997 PP
2B342.31.4e-133684431493
                 T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 ++  +p +f+ ++g +   s   tl++++g +++v +  ++k+g++++ +GW++Fv+++ +++g fv+F++ ++s+f+ +
  GAY51865.1 368 KMQKIPQNFVGRFGDE--LSNVATLTNPEGYVMRVGI--TRKDGKIWFDDGWNDFVEDHSIDVGYFVLFQYRKNSKFRVF 443
                 34589*****999855..8889***************..********************************999999544 PP
3B349.66.9e-16604684490
                 E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
          B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                 v++++++++++ +++p +fa+++ + +e+   +t++d++gr+  vk+  ++++++y+lt GW +F k  ++kegD++ F++++ ++ 
  GAY51865.1 604 VFLRASNMQLNYVYVPTSFARKYLNGEEC---VTVQDSDGRKLAVKV--KQSRRKYLLT-GWGKFFKKANVKEGDILFFEMIQMKKI 684
                 566788999999***********544556...***************..9999999999.********************9874444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 702 aa     Download sequence    
MASSKIVKPK VSSSMLESPF HFFKVILPSP PGDKKLMIPP LFAIKFGHEL TNAATLTLPN  60
GRQSQVSLKK DGRNVWFRDG WHEFVEIHSI TPGYFLVFKY EKNSRFRVHI FDTTACEIKY  120
PCMSEESENV KDEMVDSEDC VEISKRLFAQ KSSKWNCKFG ASLENSKVKY KCDPGSKKRK  180
KEELAEKNES DELDLCDSLG EMGIYVSKRR RISAEGRKRA IRIATLLKLK NPTFMVILLP  240
RDKHCARIPK NFVKRFGHEL YNAANGTSNI WFHHGWYDFI KSYSISAGYF GVFNYVKSTT  300
FHALILDVTA CEINYPYESD ESKNEERRAE HKMPSSMKKT YPHFIDVILD STIEDKKMIH  360
SHLTLFAKMQ KIPQNFVGRF GDELSNVATL TNPEGYVMRV GITRKDGKIW FDDGWNDFVE  420
DHSIDVGYFV LFQYRKNSKF RVFIYNTTTC EIQYPSRNTF PPPRQNQATF DSSKSKNGCE  480
MRGKTYRMEE VKVKEESDNV NDSMQDVIGT CNSEGSVHAK IHLSETQCSS VQETDLKIDS  540
TKFKKAKHNL KDELRADSVD QVKLFALLED MDIHICESRM TLEERQEAIN VARLLKPEKP  600
SFLVFLRASN MQLNYVYVPT SFARKYLNGE ECVTVQDSDG RKLAVKVKQS RRKYLLTGWG  660
KFFKKANVKE GDILFFEMIQ MKKILLKVSR FSKIKRESYE PT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177181KKRKK
2208212KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.15e-40B3 family protein